Spirosoma oryzicola: LQ777_16215
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Entry
LQ777_16215 CDS
T08981
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_16215
Enzymes [BR:
soq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LQ777_16215
DNA repair and recombination proteins [BR:
soq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LQ777_16215
Prokaryotic type
LQ777_16215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF3509
Motif
Other DBs
NCBI-ProteinID:
UHG89787
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Position
complement(3842860..3844179)
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AA seq
439 aa
AA seq
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MTFSTDQPIALCWLRRDLRLDDNAALYHALKSGHPVLAVFIFDRIILDPLSDRHDRRVAF
IHQQIHALQDQLTQLGSTLLVYYGEPLTIWKQIMQAMPLAGVYTNADYETYAKERDQQVQ
QLLAEQGIGFHAYKDQTIFDTDEVLTDAKKPYSVFGAYQRKWKANLTDFYVRSYPTRDYF
NNFYQTAAQSIPSLASMKFKPVNESFPATQVSDQLLEHYAKNRDKPALEGTTQLSIHLRF
GTISIRQLVRQAQAHSERFLTELIWRDFYFQILDHFPHVEHKPFRPNYEAVPWLNREEDI
ERWQQGMTGYPLVDAGMRQLNQVGWMHNRARLNAASFCIKHLLIDWRIGEAYFAQKLRDY
DLAANNGNWQWVAGSGNDASPFFRVFNPVSQAKTFDPKEAYIREWIPEYGTPDYPKPMIE
HNFARQRAIDTYRKALNRT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaccttttcaactgaccaacccattgccctctgctggctccgccgtgatttgagactc
gacgataatgccgctctctaccacgcgctcaaaagcgggcatccggttctggctgttttt
atcttcgaccgcatcattcttgacccgctgagcgatcggcacgaccgccgggtcgcgttt
attcaccagcagattcatgcgctacaggaccagctgactcaactgggctctacactgttg
gtatattacggtgaaccgctgacgatctggaaacaaatcatgcaggcaatgccgctggcc
ggcgtgtataccaacgctgactatgagacctacgccaaagaacgcgaccagcaggtccag
caattgctagcggagcaagggattggttttcacgcctacaaagaccagacgatcttcgac
accgacgaggtcctgaccgacgcaaagaagccttactcggtctttggcgcttatcaacgg
aagtggaaagccaacctgaccgacttttacgttcgctcttacccgactcgggattatttt
aacaacttctatcagacggcggctcagtcaatacccagtttagcgtctatgaagttcaaa
cccgtcaacgagtcgtttccggctacgcaggtatcggatcaactgttagagcactacgcc
aagaaccgggacaagcccgctctggaaggaaccacccaactgagtattcatctacgcttc
ggcaccatcagcatccggcagttggtgcgccaggctcaggcgcacagcgagcgttttttg
accgaactgatctggcgtgatttttactttcagattttagatcatttcccccacgttgaa
cataagccgtttcgaccaaactacgaagctgttccctggctgaaccgcgaagaagacatt
gaacgctggcagcaaggcatgacggggtacccgctggtagatgcgggtatgcgtcagttg
aaccaggttggctggatgcataaccgggctcggctcaatgccgctagtttctgcatcaaa
cacctgttgatcgactggcggattggtgaagcttattttgcccaaaagctgcgcgactac
gatctggcggccaacaacggtaactggcagtgggtcgctggttcgggcaacgatgcttcg
ccgtttttccgggtttttaatccggtttcgcaagccaaaaccttcgatccgaaagaagct
tacatccgggaatggatacccgagtacggtacgccggactacccaaagcccatgatcgag
cacaacttcgcccgccaacgagcgatcgacacctaccgaaaagcattgaatcgaacatag
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