Spirosoma oryzicola: LQ777_17600
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Entry
LQ777_17600 CDS
T08981
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
soq
Spirosoma oryzicola
Pathway
soq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LQ777_17600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_17600
DNA repair and recombination proteins [BR:
soq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LQ777_17600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
TetR_C_43
DivIVA
Motif
Other DBs
NCBI-ProteinID:
UHG90057
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Position
4160818..4163250
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AA seq
810 aa
AA seq
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MLYPNTLEQKLGFDTIRQHLKDACVSQLGQDYVEKIRFTDNAQLIDKLLRQTDEFKQIVQ
YEPEFPSSNYIDVRPHLNRARVEGLALTEAEFFDLKLALRTIQDCLKFLAKREENNAHAD
RSFPFLRELAGPIGVDKNLTNALERVIDDRGLVRDSASPELASIRRRIISEQANLRKRLD
SILRQARQNGWIPDDLSLTIRGGRLVIPIAAEHKRKIKGFVHDESQTGQTVFLEPAEVFD
ANNEIRELEYEERREIHRILLALTDQIRPHLDELRKAVNFLAQIDFIRAKAKLAVQLDAI
MPKLIERPFVNWIDARHPLLHLSFQKQGKTVIPLSVRLEEKTRILIISGPNAGGKSVALK
TIGLVQYMLQCGLLVPMADYSEMGVFQNLFIDIGDEQSLENDLSTYSSHLTAMKQFVIGS
NKRTLFLIDEFGTGTEPGLGGAIAESILEELNKSGAYGVINTHYTNLKVFADKTSGLING
AMRFDGENLEPLYQLEIGRPGSSFAFEIAQKIGLPKGVIDRAKEKLGNQQVNFEKLLKEL
DIEKRVFSEKNLEISINQRKLAQQLAEYTALKTRLDNEQKLLINNAKLKAKALVQEANQR
IESTIREIKENKAEREATRQVRQDLEQFEQKELKPETLVADKPKPAEEEFEADNGAITVG
SYVRIAGQNAVGQVLSLRGKDAEIRIGDLKSNVKVNRLEKVSKKAFKDATETKDDRPRSQ
GLDMNEKMQNFSFNLDIRGKRGEEALGEVDRFVDDALMLGYPELRIVHGKGDGILRTLVR
NHLRGYKQVGKMEDEHADRGGAGVTIVRMK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgctttacccaaatacactagaacaaaaactcgggtttgacaccattcgtcaacatctc
aaagacgcctgcgtcagtcagttaggccaggattacgttgagaaaattcgatttacggac
aacgctcaactgattgataaactgctacgacaaaccgatgagtttaagcagattgtccag
tacgaacctgaatttccaagcagtaattatattgacgttcggccccacctgaaccgcgcc
cgcgttgaaggtctcgccttgacggaagccgaatttttcgatctaaaactggcgctgcgg
accattcaggactgtctgaaatttctcgccaaacgcgaagaaaacaacgcccatgctgac
cgtagctttccgttcctgcgtgaattggccggtccgataggtgtcgataaaaatttaacg
aacgccctggaacgggtcatcgatgatcggggtcttgtccgcgactcggcttcgcccgaa
ctggccagcatccgtcgccgtattattagtgagcaggccaacctgcgcaaacggctcgac
agcattttgcggcaagcccgccagaacggctggatcccggacgatctaagcttaaccatt
cggggtggacggttggtgattccgattgccgctgaacacaagcgcaagatcaagggattt
gtgcacgatgagtcgcaaacgggacaaaccgtgtttctcgaaccggctgaagttttcgac
gcgaacaacgaaatccgggaacttgagtacgaagaacggcgcgaaatccaccggattctg
ctcgcattaacggatcagattcgtccgcatctggacgaactcaggaaagccgtaaacttt
ctggcccagattgacttcatccgggcgaaggcaaagctggcggttcaactggatgctatc
atgccaaagcttatcgagcgaccattcgtgaactggattgacgcccggcatccgctgttg
cacttatccttccagaagcagggaaaaacggtcataccgttaagcgttcgccttgaggaa
aaaacacgaattctgatcatttccggtcccaacgcgggtggtaagtcggtagcgctgaaa
accattggcctggtacagtacatgctccagtgcggattgctggttccgatggcggactac
tccgagatgggcgtttttcagaacctattcattgacattggcgacgaacaatcgctcgaa
aatgacctgagtacctattcgtcgcacctgacggcgatgaagcagtttgtgattgggtcc
aacaaacggactttgtttctgattgacgagtttgggacgggtacggagccgggtttgggc
ggagcaattgcggagtcgatcctggaagaattaaataagtcgggggcttacggagtcatc
aatacgcactacaccaacctgaaagtctttgccgacaaaacgtcgggattgatcaacgga
gcgatgcgcttcgatggcgaaaatctggaaccgctctaccagctggaaattggtcgtccg
ggtagttcgtttgccttcgaaattgcgcagaagatcggcttacccaaaggcgtaatcgac
cgggcaaaagagaagctgggcaatcagcaggtaaacttcgagaagctgttaaaagagctg
gatattgaaaagcgtgtgttctcggagaaaaacctggagatcagcatcaatcagcggaaa
ctggctcaacaactggctgaatatacggcgctgaaaacccggctcgacaacgaacagaaa
ctcttgattaataacgccaaactgaaagcaaaagcgttggttcaggaagcgaatcaacgg
atcgagagcacaattcgtgagatcaaggaaaataaggctgaacgcgaagcaacccgacag
gttcggcaggatttggagcagtttgagcagaaagagctaaagcccgaaacgcttgttgcg
gataaacccaaaccggcagaagaagaatttgaagccgacaatggggcaattacggtcggt
agctacgtacgcattgccggacagaatgcggtgggtcaagtcctatcgttgcgcggtaaa
gatgccgaaattcgcatcggtgatctgaagtcgaacgtgaaagtgaatcggctggaaaag
gtaagcaagaaagccttcaaagacgcgactgaaacgaaagatgaccgcccgcgtagtcag
gggctggatatgaacgagaagatgcagaactttagcttcaacctcgacatccggggcaag
cggggcgaagaagccctcggcgaagtagaccgttttgtcgatgatgcgctgatgctcggt
tatcccgaattgcgcattgttcacggcaaaggcgacggtattcttcggacgctcgtacgg
aatcacctgcgtggttacaagcaagttggtaagatggaagacgaacacgccgaccgcggt
ggcgcgggcgtaaccatcgtccgaatgaaatag
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