Spirosoma oryzicola: LQ777_18295
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Entry
LQ777_18295 CDS
T08981
Symbol
infB
Name
(GenBank) translation initiation factor IF-2
KO
K02519
translation initiation factor IF-2
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
soq03012
]
LQ777_18295 (infB)
03029 Mitochondrial biogenesis [BR:
soq03029
]
LQ777_18295 (infB)
Translation factors [BR:
soq03012
]
Eukaryotic type
Initiation factors
MTIFs
LQ777_18295 (infB)
Prokaryotic type
LQ777_18295 (infB)
Mitochondrial biogenesis [BR:
soq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
LQ777_18295 (infB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
EF-G_D2
GTP_EFTU_D2
IF2_N
MMR_HSR1
Ras
SRPRB
Ribosomal_S28e
FeoB_N
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-ProteinID:
UHG90192
LinkDB
All DBs
Position
complement(4301292..4304702)
Genome browser
AA seq
1136 aa
AA seq
DB search
MAEDKSMRLSQVAKILNKGLSSVANSLSAKGFKVEINPNTKINMEQLEVLAKEYKSTELL
NGARRSEPSVAVAEPPRRREEEVILYRRDDAGRPISDAKADAPKTDVPRVDTPKPVSAES
KPAPQTAATGLPGLKVIGKIDLNAKPAPAAKAPAPQVAKPVETPRVEPAQAEVAKPVPSQ
PVVAQPPVETPKPVQPAEVKPTVTPPVVTPAPAVAPKVETPQPAPVAQPKIEPAPVAPVQ
PRPEPAQPVARTEAPRVETPKPAEPVNNPVAKVEPTRQENRDTTASSQPKAAAPVPTPPV
ANDAEEPAAKTETIRAAGSHQLGGLKILGKIELPVNNPRQGGGGNSNADKKKRKRIRGGR
DGAVGGTNQPNQGGNQPQGQGNQNRNDRGPRDGQGDRSPVNRDNNRPQGDRNQGGQRDNN
RPQGDRNQAPANRSANSNNNAQPQGQGNQNRNAQSQPSSDNQNTNNRTGGGNNNNGRSGG
NRDRAGGGNNSGRSGGNRREAPTQADVRKSIQQTNARMQGNSPNRGADRRRDRRADRAER
DRLASEQEELEAKILKVTEFVSANDLASLMNVSINEVISVCLNLGMFVSINQRLDAEAIT
VIADEFGYDVQFVSAEDETEAGIDVTADEPDELQPRAPIVTIMGHVDHGKTSLLDYIRRA
KVAAGEAGGITQHIGAYSVKATDDRMITFLDTPGHEAFTAMRARGAKVTDVVIIVIAADD
SVMPQTREAINHAQVAGVPIVFAFSKVDKPGAEADKIRTELSAMNFLVEEWGGKYQAQEI
SSKSGMGVDDLLEKVLLEAELLELKANPDRRALGTVIEASLDKGRGYVSTVLVENGTLRQ
GDVMLVGAHYGRIRAMTNDRGERIKEAGPAQPVQILGLPGAPQAGDKFNVMETEREAREI
ANKREQLLREQTLRTRKHITLEEIGRRKAIGSFKELNVIVKGDVDGSVEALSDSLLQLST
EEVQVNIIHKAVGQISESDILLASASDAVIVGFQVRPSANARRLAEQEQIEIRLYSIIYD
AINEVKDAMEGLLAPTTEEVVTGNIEVRDVFKISKVGTVAGCYVTDGIIKRNNKIRVIRD
FIVIHTGEISALKRFKDDVNEVRSGYECGLSVRNFNDIEVGDTIEAFEIKEVKRTL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagataagtcaatgcgcctgagccaagtggcaaaaattctcaacaaaggactt
tcctctgttgcgaatagtctgtctgccaaagggtttaaggtggaaattaatcctaacacc
aaaatcaacatggaacagttggaggtgttagcgaaggagtataaatcaacggaactcctg
aacggagctcgccggtccgaaccgtcggttgcggtcgccgagccaccgcgtcgtcgggag
gaagaggttattttgtaccgtcgtgatgacgcaggtcgtcctatttcggacgcgaaggcg
gacgcccctaaaacagacgtccctcgggtagacactcctaaaccagtgtcagccgagtca
aaaccagctccgcaaaccgcagcaaccggtttgccagggctaaaagtgatcggcaaaatt
gatcttaacgcgaaaccagctccggcggctaaagctccggctccgcaggtagcgaaacca
gtagaaacacctcgtgtagagccagctcaagcggaggttgctaaaccagtaccatcacaa
ccggtagttgcacagccgcctgtagaaacaccgaagccggttcaacctgctgaggttaag
cctaccgttacaccacctgtggtaacccctgctcctgcggtagctcccaaagtggagact
cctcagccagcacccgttgcgcagcctaaaatcgagccagctccggtcgctcctgttcag
ccacggcctgaaccagcgcagccagtagctcgtacagaagctcctcgtgtggagacccct
aaaccagctgaacctgtaaataatccagttgccaaggtggaaccgacgcgtcaggagaat
cgtgatactactgcaagcagtcagccaaaagctgctgcccctgtgccaactcctccagtc
gcgaatgacgctgaggaaccagcagctaaaaccgagacaattcgggcggctggtagccat
caacttggtggtttgaaaattcttggcaagattgaattgcctgtcaacaacccgcgtcag
ggtggtggtggcaatagcaacgccgataagaaaaaacggaaacgcattcgcggtggtcgc
gatggagctgttggtggtaccaaccagccgaatcaaggcggtaatcagccacaaggccaa
ggtaatcaaaaccggaatgaccgtggacctcgtgacggacaaggtgatcgtagtcctgta
aaccgggataacaaccggccgcagggtgatcgcaaccaaggtggacaacgggataacaac
cgaccacagggtgatcgtaaccaggcaccggcaaaccgttctgcgaattcgaacaataac
gcccagccgcaaggtcagggtaaccaaaatcggaacgctcagagccagccttcgtcagac
aaccaaaataccaacaaccggacaggtggtggtaataacaacaatggtcgtagcggtgga
aaccgtgatcgggcaggtggtggcaacaacagtggccgtagcggaggaaaccgtcgtgaa
gcacctacgcaagctgatgttcgtaagtcgattcagcagacaaacgcccggatgcagggt
aattcgcccaaccggggagctgaccgccgacgtgaccgccgggccgaccgggctgaacgt
gatcgtttagccagcgaacaggaggaactggaagcaaaaatcctgaaagtaacggagttc
gtatcggcaaacgatctggcttcgcttatgaacgtgtcgatcaacgaagttatctcggtt
tgtttgaacctgggtatgttcgtctcgatcaaccagcggttagatgcggaagcgattacg
gttattgcggatgaattcggttacgatgtacagtttgtatcggcagaagatgaaacggaa
gcgggtattgacgtaacagcggacgaaccggatgaacttcagcctcgtgcgccaatcgtt
acgatcatgggtcacgttgaccacggtaaaacgtcgctgcttgattacatccgtcgtgca
aaagtagccgccggtgaagccggtggtatcacgcagcacatcggtgcctatagcgtgaaa
gcgactgacgaccggatgatcacgttccttgatacaccgggtcacgaagcctttacggcc
atgcgggcacgcggtgcgaaagtaaccgacgtcgttattattgtaattgcggctgacgac
agcgtgatgccgcagacgcgtgaagcaatcaaccacgcacaagtagccggtgtacctatc
gtatttgctttctcaaaagtagataagccgggggccgaagctgacaaaatacggacggag
ctttcggctatgaacttcctcgttgaagaatggggtggtaagtaccaggctcaggaaatt
tcgtccaagtcaggtatgggcgttgacgatctgcttgaaaaagtactgctcgaagccgaa
ttacttgaactgaaagcgaatccggaccgtcgggcgcttggtaccgttatcgaagcatcg
ctcgacaaaggccgtggctacgtatcgacagtactggttgaaaatggtacgttgcgtcag
ggagatgtcatgcttgtcggtgcgcactacggtcgcattcgggctatgacaaatgaccgg
ggtgagcggatcaaagaagcaggaccagcacaacccgttcagattcttgggttgccaggt
gctccgcaggcaggtgacaagtttaacgtgatggaaacggagcgcgaagcccgcgaaatt
gctaacaaacgggagcaactgctgcgcgaacaaacgctacgtacccgcaagcacattaca
ctcgaagagattggccgtcggaaagcgattggctcgttcaaagagcttaatgtgattgtg
aaaggtgacgtggacggttcggtcgaagccttgtcggattccttgttgcaactgtctacg
gaagaagttcaggtgaacatcatccacaaagcggtcggacagatttccgagtcagatatt
ctgctggcatcggcttcggatgcggttatcgtcggcttccaggtgcggccatcagctaat
gccaggcggttggcagaacaggaacagattgaaattcgtctgtactcaatcatctacgac
gcgatcaacgaagtcaaagacgctatggaaggtctgctagcaccaaccacagaagaggtt
gtgactggtaatatcgaagtccgtgatgtgttcaagatcagcaaagttggtacagtagcc
ggttgttatgtgacggacggtatcatcaaacggaacaataaaatccgggttatccgcgac
tttatcgtgattcatacgggtgaaatcagcgcgctgaaacggttcaaagacgacgttaac
gaagtgcgttcaggctacgaatgtggtttgagcgtccgaaacttcaatgacattgaagtg
ggagacacgatcgaagcgttcgaaataaaagaagtgaagcgtacgttgtaa
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