Spirosoma oryzicola: LQ777_20085
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Entry
LQ777_20085 CDS
T08981
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00550
Peptidoglycan biosynthesis
soq01100
Metabolic pathways
soq01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQ777_20085
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQ777_20085
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
LQ777_20085
Enzymes [BR:
soq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LQ777_20085
Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LQ777_20085
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UHG90537
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Position
complement(4741003..4742967)
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AA seq
654 aa
AA seq
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MLENRKYVIIGVFCLVALTYLARLFYLQVLDDTYSLGASKNSIKRVIEIPYRGQIYDRNN
KLIVYNTPVYDLYVTPKQVRIPDTVAFCRMMDITRSDFDSIMGLAKNYSPVKPSLFLRQL
SKEDFARIQDALVDYRGFEPVISSMRTYPAHTMANALGYVSEISKKKLEEQDIPYYRQGD
YIGNNGLEEQYEEQLRGKRGVKFMMQNVRGVNKGSWKNGAFDTLAVAGQNLITGIDVEVQ
RYADSLMQNKVGAVLAVEPSTGEILVSVSAPTYDPNLLSSRYFSKNYRALVKNPYKPLIN
RPIMSSYRPGSTFKLIQALVAQQQGSLFPNTIYGHAGSPMRCHCRGGNNLRGAVQNSCNP
YFYYVFRKFLYFNGESNVFKASAIGLQQWHDMVEKFGIGSRLGVDLPSERKGNLPTPEYY
DKAYRGALRWKFSNVYSLSIGEGELLISPLKLVNLAATIANRGWYITPHYIKGFEKAGAG
VPSEYHERHETGIDYKYYLPVIDGMRGAVANGTVTPLANIAGIDLCGKTGTSQNAKFGHK
FDHSIFIGFAPMNDPKIAVAVFVENAGWGGKAAASVAALVAERYLKRITEAKKLEAQVLA
SNYLPPANFLLTPKKPAPSKKDTVQKEPKPVPSKPFMTSTKPRSTTATATVSGY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgttggagaatcgtaagtatgtcattatcggcgttttctgtcttgtcgcactgacgtat
ctggcccgattgttttatttgcaggtccttgacgatacctactcgctgggagcgtcgaag
aattcgattaagcgagtcatcgaaataccctatcgcggacagatttatgaccgcaacaac
aaactgatcgtttacaatactcctgtttacgatctgtacgtaacgcccaagcaggtgcgt
attccggatacggtagcgttttgccggatgatggacattactcgttctgactttgacagt
atcatggggctggcgaagaattactccccggttaaaccatcgctgttcttgcgtcagctg
tccaaggaagattttgcccggattcaggacgcgttggtggattaccgtggttttgaacct
gtgattagctctatgcgaacttacccggcgcatacgatggctaacgcgttgggatacgtc
agcgaaatcagcaaaaagaaactcgaagaacaggatattccgtattaccggcagggcgat
tatatcggtaacaacggtttggaagaacagtacgaagagcaattgcggggcaaacggggc
gtcaaatttatgatgcagaacgtgcgtggggtgaacaaagggtcctggaagaacggggct
ttcgacacgctcgccgttgccgggcagaacctcattacgggcatcgatgtagaggtacag
cggtacgccgacagcctgatgcaaaataaagtgggagcggtgttagccgtagagccatcg
acaggggaaattctggtttcggtttcagcgccgacttacgacccgaatctcttgtcgagc
cgttatttttcaaagaattaccgcgccttagtcaagaatccgtacaagccgctgatcaat
cggcctatcatgtccagctaccgacctggatcgacgtttaagcttattcaggcgctggtt
gctcagcaacagggatcgctttttccaaatacgatctacggtcatgctggatcgccgatg
cggtgtcactgccggggtggtaacaacttgcgcggggccgtgcaaaactcctgtaatcct
tacttctactacgtctttcggaagtttttgtatttcaacggcgaaagcaacgtattcaaa
gcgtcggcaataggcttgcagcagtggcacgatatggtcgaaaagtttggcatcggctca
cggctaggcgttgatctaccaagcgaacgcaaaggaaatctaccaacgcctgagtactac
gacaaggcgtaccggggtgcgttgcggtggaagttctcgaacgtttactcgctgagtatt
ggtgaaggtgagttgttgatcagcccgcttaaactggtcaacctggcggcaacaattgcc
aaccggggttggtacattaccccgcattacattaagggtttcgaaaaggcgggggctggt
gtacccagtgaataccacgaacgccatgaaaccggtattgactacaaatattacctgccc
gttattgacggaatgcgcggagcggttgccaatggtaccgtgactccgctggcgaatatt
gccgggattgatctttgcggaaaaacgggcacgtcgcagaacgcgaagttcggccacaag
ttcgatcactcgatttttatcgggttcgcccccatgaatgaccctaaaattgcggtggct
gttttcgtcgaaaatgccggatggggtggtaaagcagcagcatccgtagcggctttggtt
gctgaacgatatctgaaacggataaccgaagcaaaaaaactcgaagcgcaggtgctggcc
tccaattatttgccacccgccaactttctgctaacgccgaaaaaaccggccccttcaaaa
aaggatactgtgcagaaggaacccaagccagtaccgtctaaaccattcatgacctctaca
aagccaaggtcaacaacggccacagcgacggtgagtggctattaa
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