Spirosoma oryzicola: LQ777_20305
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Entry
LQ777_20305 CDS
T08981
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LQ777_20305 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soq01007
]
LQ777_20305 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soq03016
]
LQ777_20305 (aspS)
03029 Mitochondrial biogenesis [BR:
soq03029
]
LQ777_20305 (aspS)
Enzymes [BR:
soq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LQ777_20305 (aspS)
Amino acid related enzymes [BR:
soq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LQ777_20305 (aspS)
Transfer RNA biogenesis [BR:
soq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LQ777_20305 (aspS)
Prokaryotic type
Other AARSs
LQ777_20305 (aspS)
Mitochondrial biogenesis [BR:
soq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LQ777_20305 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UHG90579
LinkDB
All DBs
Position
4795403..4797190
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AA seq
595 aa
AA seq
DB search
MLRTHTCGELRLTDVNKTVELTGWVQTIRDKGGVLWIDLRDRYGITQLLLEDGQTAPELF
ATARSLGREFVLKATGTVIERKSKNPNIPTGDIEIKVTALDILNAAKLPPFLIEDDTDGG
DDLRMKYRYLDLRRNPVRRNLELRHRMAQQTRLYMDGQDFIEVETPVLIKSTPEGARDFV
VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDCEMS
FVEQEDILNMFEGLIRHLFKAVKGVDLAEVPRMTYADAMRLYGSDKPDTRFDMQFTELKA
VRRPGTFDTIDLTSGKGFGVFDSAELVVGINAPGCAHYTRKQLDELTDWIKRPQVGAKGL
IYVRYNEDGTLKSSVDKFYSEDDLKKWAVQFNAKPGDLMLIISGDANKARKQLNELRLEM
GSRLGLRDPNVFSSLWVLDFPLLEYGEEEQRWFAMHHPFTSPKPEDISLLDSDPGAVRAN
AYDLVINGTEVGGGSIRIFNRDLQARMFSLLGFSDEEAKAQFGFLMDAFEYGAPPHGGIA
FGFDRLCSIFGGADSIRDFIAFPKNNSGRDVMIDSPSTISQAQLNELKIETVATK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaacgcatacctgcggagaactccgccttactgacgttaacaagacggtcgaa
ctgactggctgggtccagaccattcgtgataagggtggtgtattgtggattgaccttcgc
gaccggtacggtattacgcaacttctgctcgaagacggccagacagcacccgaactcttt
gcaactgcccgctcgctgggccgcgaatttgtcctgaaagcaacaggaacggtgatcgaa
cggaagtcgaaaaacccgaatataccaacgggtgatattgaaattaaggtgacggcgctg
gacattctgaatgcagctaagctacctcctttcctcatcgaagatgataccgacggtggc
gacgatctgcggatgaagtaccgctaccttgatctgcgtcgcaatccggttcgccgaaat
cttgaactgcgtcatcggatggcccagcagacgcggctttacatggacggtcaagacttc
atcgaagttgaaacaccggtattgattaagtcaacgcccgaaggagcccgcgattttgtg
gtaccaagtcgcatgaatccgggtgagttctacgcgcttccgcaatcaccgcagacgttc
aagcaattgttgatggtatcgggttttgatcggtactaccagattgtgaagtgttttcgc
gatgaagatttacgcgccgaccgtcagcctgagtttacgcagatcgactgtgaaatgtcg
ttcgtagagcaggaagatattctgaacatgtttgaagggctgattcgtcatctgttcaaa
gccgttaaaggtgttgatctggccgaagtgccccggatgacctatgccgatgcgatgcgc
ctgtacggttccgataagccggatacccgtttcgacatgcagtttaccgaactgaaagcg
gtccggcgtcccggcacgtttgacaccatcgacctgacatcgggcaaaggattcggcgta
ttcgactcggcagagttggtagtaggcattaacgcaccgggttgtgcacactacacccgc
aaacaactcgacgaactgaccgactggatcaaacgtccccaggttggcgcaaaaggattg
atctacgtccgctacaacgaggacggtacgctgaaatcgtcagttgacaagttttatagc
gaagacgatctgaaaaaatgggcggttcagttcaatgccaaaccgggtgatctgatgctg
attatttcgggtgatgccaacaaagcccgtaaacagctgaacgaactccgtctggaaatg
ggcagtcggctcggcctgcgcgatccaaacgtgtttagcagcctgtgggtattggacttc
cccctgctcgaatacggcgaagaagagcagcgctggtttgccatgcaccaccccttcacg
tcgcccaagccagaagatatttcgcttctggacagcgacccaggtgcggtacgggccaac
gcctatgacctcgttatcaacggaaccgaagtcggtggtggttccattcggattttcaac
cgtgatttgcaggctcgtatgtttagtctgctcggcttctcagatgaagaagcgaaagcg
cagtttggcttcctgatggatgctttcgagtacggtgctcctccgcacggcggaatagcc
tttggattcgaccgcctgtgctcgatcttcggcggggctgattcaatccgcgacttcatc
gctttcccgaaaaacaactcgggtcgcgacgtgatgattgattcaccgtctactatcagt
caggctcagcttaatgagctaaagatcgaaacggtagcaacaaagtaa
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