Spirosoma oryzicola: LQ777_20765
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Entry
LQ777_20765 CDS
T08981
Name
(GenBank) glycoside hydrolase family 78 protein
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00946
Degradation of flavonoids
soq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
LQ777_20765
Enzymes [BR:
soq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
LQ777_20765
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_C
Bac_rhamnosid_N
Bac_rhamnosid
Glyco_hydro_2_N
GDE_C
Motif
Other DBs
NCBI-ProteinID:
UHG93719
LinkDB
All DBs
Position
complement(4913350..4915722)
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AA seq
790 aa
AA seq
DB search
MAFWANSLIAQTPASNWTNQYWPARWILHPTAPARQYGIYHLRKVIDLAQKPARFVVHVS
ADNRYRLFVNGKAVAHGPARSDTQNWNYETIDLAPFLQAGNNVLAAQVWYMGEGAPFAQM
SYQFGFLLQGDGDAEKIANTDASWKILHNLAYSPIKNDIPKLRTYIVVGDGDRVDGARYP
WGWEQLNFDDKAWVAAKPLGFATKPRGLGTDGNWGLVPRTIPMMEEKPLRLATVRRSENG
RMDDTFLQGKAPVTVPANTKAVFLLDQGYLTNAYPELTVSQGQGTTVTLSYAEALIDAKG
QKGNRNEITGRTLRGFDDQFVADGGDRRTFRPLWFRTYRYLQLTVETKDKPLVLDDLVGQ
FTGYPFEEKAQFTASDTTLKPLWNVGWRTARLCAGENYYDCPYYEQLQYTGDTRIQSMIS
LYVTGDDRLMRKAIMDYEHSRFNDGLTQSRYPSADFQVIPTFSLFWVCMVHDYWMHRQDD
AFVKSFLPGIMGVLNWHEQRLAVTGLNGPLEWWNFVDWSKWQNAGDEIAGGVPAGARKGG
SSILSLQQAYTYFRAGDLLAHYGKNEQAEHYRELGRKLNKAIYAQCWDAGRNLMADTPLA
AAGQSGKTSFSQHANILAVLTDAVPAAQQASLLQKVMTDTSLTQATFYFKFYLFEALKKA
GLGDQFVTQLKPWRDMLAMGLTTFAENPEPTRSDCHAWSASPLYEFLSLTCGIKPAEPGF
KTVRIEPFLGDLTNVEGRMPHPLGEIAVQFQKTPTGGLTGTITLPATLTGILRWKGKTLP
LKAGKQAVSL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
ttggcgttttgggctaattcgctaatcgctcaaacgccagcctccaactggaccaatcaa
tactggcctgcccgctggattttgcacccgactgctcccgcccggcagtacggtatctat
catttgcgaaaagtgatcgacttagcgcaaaagcccgcccgtttcgtggttcatgtgtcg
gcggacaatcgctatcggttgttcgtgaacgggaaagccgttgcgcatggtcccgcccga
agtgacacccaaaactggaattacgaaaccatcgatctcgctcccttcttacaggcgggt
aacaacgtgttggctgcgcaggtgtggtacatgggtgagggcgctccctttgcgcagatg
agctatcaatttgggtttctgttgcagggtgacggcgacgcggagaagatagccaatacc
gatgcttcctggaagatactccacaatctggcgtattcgcccattaaaaacgacattccg
aaattacgtacctacatcgttgtgggcgacggtgaccgtgttgatggggctcgttatccc
tggggctgggaacaactcaacttcgatgacaaagcgtgggtagctgctaaaccgcttggc
tttgcgactaaaccacgtggtttgggaaccgatggcaactggggacttgtgccacgcacc
attccgatgatggaggaaaagccgctgcggctggcgacggttcggcgcagtgaaaacggg
cgcatggacgatacctttttacaaggtaaagcgccggtaaccgttcccgccaatacaaaa
gccgtattcctgctggatcagggttatttgaccaacgcttatcccgaattaaccgtcagc
caggggcagggtacaaccgtgacgctgagttacgccgaagcgttgattgatgcgaaaggt
cagaaaggcaatcgaaacgagattacgggtcgaacgttgcgcggtttcgatgatcagttc
gtagccgatggaggagatcggcgtaccttccgcccactctggtttcgcacctaccgctac
ctgcaactaacggttgagacaaaagataaaccgctggttctggatgaccttgtcggtcag
tttacgggctatccattcgaagaaaaagcgcagtttaccgccagcgatacgacattaaaa
ccgctctggaacgtcggttggcgcaccgcccggctttgtgcgggtgagaactactacgat
tgtccgtactacgaacagctgcaatataccggcgacacgcgcattcaatcgatgatttcg
ctgtacgtaactggcgacgaccggctaatgcggaaagcgattatggactatgaacacagc
cgcttcaacgacgggctgacgcagagccgctacccatccgccgattttcaggtgattcct
accttttcgttgttctgggtttgtatggtgcacgattactggatgcaccgccaggacgat
gcgttcgtaaaatcatttttgcccggaataatgggagttctgaactggcatgagcaacga
ctggcggtaaccggcctgaacggaccgctggaatggtggaattttgtagactggtcgaag
tggcaaaatgcgggtgatgaaattgccggtggtgttccggcgggagcgcgcaaaggtgga
tcaagtattttatcgcttcaacaggcatacacctacttccgggcgggtgatttgctagcg
cattacggcaagaacgagcaggccgaacattaccgcgagttgggccgtaaactgaataag
gcgatctatgcgcaatgctgggacgcgggccggaatctgatggcagatactccgcttgcg
gctgccggacaatccggtaaaactagttttagccagcacgcgaatattctggccgtactg
acggatgcagtacccgcagcgcaacaggcatcgctcctgcaaaaagtgatgaccgatacc
tccctgacgcaggctacgttttacttcaaattctatttgttcgaagcgttgaaaaaagca
ggtcttggtgatcagtttgtgacgcagctaaaaccctggcgcgatatgctggctatgggc
ttaaccacctttgccgaaaatccggaaccgacgcgttcggactgccacgcctggagcgca
tcacccttatacgaatttctgtcgttgacctgcggcataaaaccggctgaaccgggtttt
aaaaccgtacgcattgagccgttcctgggagatttaactaatgtggagggacgaatgccg
catccgttaggcgaaatagcggtacagtttcaaaaaacgccaacgggtggattgaccggt
actataactctgcccgcaaccctgacgggtatactgcgctggaaaggaaaaacgctgccg
ctcaaggcggggaagcaggccgtaagtctataa
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