Spirosoma oryzicola: LQ777_21035
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Entry
LQ777_21035 CDS
T08981
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
soq
Spirosoma oryzicola
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_3
AAA_19
nSTAND3
AAA_18
AAA_16
AAA_7
AAA_2
AAA_30
MCM
PDE8A_N
AAA_14
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UHG90716
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Position
complement(4989101..4990252)
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AA seq
383 aa
AA seq
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MAKLIIVDDEKSIRAALRDILEYEGYEVDEAKDGEEGLDMITRTNYDVALCDIRMPKMDG
LELLMKAHEASKGTQFIMISAYGNVENAVEATKRGAFDFITKPPDLNRLLITVRNAIERS
KLVQETKTLKKRIYKLNEIVGDSAPIRRVKETINRVAATEARVLITGPNGSGKEMVAKQI
HEKGSRSAQPLVEVNCAAIPGELIETELFGHEKGAFTGATARRIGKFEQADGGTLFLDEI
GDMSLSAQAKVLRALQENKITRVGGDKEIKVNVRVMAATNKDLRQEIANGNFREDLFHRL
SVIVIHVPPLAERRSDVPLLTDKFLHDIATEYGSAPKELTPDAMTYLESLPWTGNVRELR
NVIERLVIMCGDEITQEDVKAYA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttgattatcgtcgatgacgagaagagcattcgggctgctttgcgcgatatt
ttagaatacgaaggctacgaagtagacgaagccaaagacggcgaagagggcttggatatg
attacacgtacgaactatgatgtagcgttgtgcgatattcgtatgcctaaaatggacggg
ctggaattacttatgaaagcccacgaagccagtaaaggcactcagttcatcatgatttcg
gcctacggaaacgtagaaaatgcggttgaagcaaccaagcggggggcgtttgacttcatt
accaaaccacccgatctcaaccgtttactcattacggttcgtaatgccatcgaacggtcc
aaattggtacaggagacaaaaacgcttaaaaaacgaatttacaaactcaatgaaattgtt
ggtgactcggcacccatccggcgcgtcaaggaaacaatcaatcgggtagcggcaaccgaa
gcccgcgtacttattaccgggccgaatggatcgggtaaagagatggttgccaagcaaatt
cacgaaaaaggaagccgttcggctcagccactcgttgaagtgaactgcgcagcaattccc
ggtgaactgatcgaaaccgaactcttcggacacgaaaaaggtgcgtttaccggagcgact
gctcggcgaatcggtaagttcgagcaggccgacgggggaacgctttttctcgatgagatc
ggcgatatgagcctgtcggcgcaggcgaaggtgctgcgggcgttgcaggaaaacaaaatc
acgcgcgttggcggagacaaagaaatcaaagtcaatgtacgcgtaatggcagctaccaac
aaagatcttcggcaggagattgccaatggtaacttccgcgaagacttatttcaccggttg
agtgtgatcgttattcacgtaccgccactggccgaacgtcgttctgatgttcctttgcta
acggataagtttctgcacgacattgccacggaatacggctctgcgcccaaagagcttacg
cccgatgccatgacttatctggagtcactgccctggacgggtaacgttcgcgagttgcgc
aacgtcattgagcggctggtgatcatgtgcggtgatgaaattacgcaggaagacgtaaaa
gcatacgcttaa
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