Spirosoma oryzicola: LQ777_21140
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Entry
LQ777_21140 CDS
T08981
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LQ777_21140 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soq01007
]
LQ777_21140 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soq03016
]
LQ777_21140 (lysS)
Enzymes [BR:
soq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LQ777_21140 (lysS)
Amino acid related enzymes [BR:
soq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LQ777_21140 (lysS)
Transfer RNA biogenesis [BR:
soq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LQ777_21140 (lysS)
Prokaryotic type
Other AARSs
LQ777_21140 (lysS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
Motif
Other DBs
NCBI-ProteinID:
UHG90737
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All DBs
Position
5014298..5016067
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AA seq
589 aa
AA seq
DB search
MLLSEQEINRRQKREELMRMGIDPYPAELFDVTATIADIRSAFQTGPETEVTPEMDLSGD
ERWGNVQLAGRLMGFRIMGSASFAEIQDSTGRLQFYFRRDDLCPDDDKTLYNTVFKKLLD
IGDIIGVRGHVFSTKTGELSVYVKEFKVLNKALRPLPVVKEVVNEKGEKEVYDAFTDPEQ
RYRQRYVDLIVNPQVRDVFVKRTKLVNSIRQFLSQRGYLEVETPILQPIHGGATARPFRT
HHNTLDMTLYMRIANELYLKRLIVGGYDGVFEFAKDFRNEGMDRTHNPEFTQVEFYVAYK
DYLWMMDTIEEMVEKVALDVAGTTKVTVGENVIDFKRPWKRLTMFEAIQEYTGVDVSAME
EDELRQVAESRGIKVDSTMGKSKLIDELFGEACEPNMIQPTFITDYPVEMSPLTKKHRSK
PGLVERFEAICNGKEIANAYSELNDPLDQRERFEEQLRLAERGDEEAMALDEDFLRALEY
GMPPTAGVGLGIDRLTMIMTNQPSIQDVLFFPQMRPEKKLEQSDESEFVAAGVPAEWVPA
VQKLGFLTVEQLRTANPNKLFNDLGGVRKKLKMEVPMPAIADVRSWTGQ
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgctactgagcgaacaagagataaaccgccgacaaaaacgcgaagaactgatgcggatg
ggcatcgacccctatcccgctgaactattcgacgtaacagcgaccattgctgatattcgg
tccgctttccagaccggtcctgaaaccgaagtaacccccgaaatggacctctccggcgac
gaacgctggggaaatgtccaactagctggacgattgatgggcttccgtattatgggtagc
gcatcctttgccgagattcaggattcgaccggacggcttcaattctatttccggcgcgac
gacctttgcccggacgacgataaaacgctgtacaacacggtatttaaaaaactgctcgac
atcggcgacatcatcggcgtacgggggcacgttttctcgaccaaaaccggtgagttgtcc
gtatacgtgaaggaattcaaggtactcaacaaagcgctgagacctttgccggttgtcaag
gaagtggtgaacgagaaaggcgaaaaagaagtctacgatgcctttaccgaccccgaacaa
cgctaccgccagcggtacgtagacctgatcgtgaatccgcaagtgcgcgatgttttcgtg
aagcgcacgaaactggtcaattccatccgtcagtttctaagccagcggggctatctggaa
gtcgaaacccctattcttcagccaattcacggtggcgcaacggcccgcccgttccgtacg
catcacaacacgctcgacatgacgctgtacatgcggattgctaacgagttgtacctgaaa
cggctcatcgttggtggctacgacggtgttttcgagtttgcgaaagatttccggaacgaa
ggtatggaccgtactcacaatccggaatttacgcaggttgaattctacgtcgcctacaaa
gattacctgtggatgatggataccatcgaagagatggttgaaaaagtagcactggacgtt
gctggtacgacgaaagtaacggtgggcgaaaatgttatcgatttcaaacgtccctggaaa
cgcctgaccatgttcgaagccattcaggaatacaccggcgtcgatgtgtcggcaatggaa
gaggatgaactccggcaagtagccgaaagtcgcggcatcaaagtggacagcacgatgggt
aaatcgaagctgatcgacgagttgttcggtgaagcctgcgagccaaacatgatccagccg
acgttcattaccgactatccggtcgaaatgtctccgcttaccaaaaagcaccgcagcaaa
ccgggtctggtagagcgtttcgaagccatctgtaatggtaaagagattgcgaatgcgtat
tcggagctaaacgacccgctcgatcaacgcgagcgttttgaagaacaacttcggctggcc
gagcgcggtgatgaggaagcgatggcgctggacgaggattttctgcgcgcccttgaatat
ggtatgccaccaacggcgggcgtcggtttgggtatcgaccgtctgacgatgatcatgacc
aaccagccttccattcaggatgtgctgtttttcccgcagatgcgccccgagaaaaaactt
gaacaatctgacgaaagcgaatttgtagcagctggggttccggcggagtgggttccagcc
gttcaaaagcttggcttccttacagttgagcaactccgtacggccaatccaaacaaactt
ttcaacgacctgggtggcgtacgcaaaaagcttaagatggaagtaccgatgcccgccatc
gctgacgtgcgcagctggacgggccaatag
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