Spirosoma oryzicola: LQ777_21520
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Entry
LQ777_21520 CDS
T08981
Name
(GenBank) LysR family transcriptional regulator
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soq03000
]
LQ777_21520
Transcription factors [BR:
soq03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LQ777_21520
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
TctC
PBP_like
Motif
Other DBs
NCBI-ProteinID:
UHG90810
LinkDB
All DBs
Position
complement(5104821..5105717)
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AA seq
298 aa
AA seq
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MLDFRLNVFYTVAKRLSFTKAAAELYVTQPAVTKHIQELENQFGTALFDRRGNQISLTAA
GSLLLRHAETIVATYRQLEFDMNALKGQPGGTLRLGASTTVAQYVIPPVLARFHEYSADI
SISLLSGNTEQVEQQLLKSDIDLGLVEGRTHHSDIRYTPFVKDELVLVCRADHPLADRDE
ITLDELKTVPILLRERGSGSLEVIEHALRGVGLRLTDLTVEMQLGSTESIKSYLGSSRCM
AFVSIFAVQDKVRTGILKVLDVQGLSIQREFYSIQLQGVTEGLADTFMRFARQHYKRN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcttgattttcgattaaacgttttttacaccgttgccaagcggctcagttttacaaaa
gcggctgccgaactgtatgtgacgcagcccgccgtaacgaagcacattcaggaactcgaa
aaccagtttggtaccgctcttttcgaccgccggggcaatcagatcagtctaacggcggct
ggtagtttgctgcttcgccacgccgaaaccatcgtcgctacgtatcgccagctggagttc
gatatgaacgccctgaaaggacagcccggtggtacgcttcggttgggagccagcacgaca
gttgctcaatacgttattccgcctgtactcgcccgttttcacgagtattcagctgatatt
tcgatatcgctactgagcggtaataccgagcaggttgaacagcagttgctcaagagtgat
attgatttggggctggttgaagggcgaacccaccacagcgatattcgctatacacccttt
gtgaaagacgaactggtgctggtttgccgggccgatcaccccctggccgaccgagacgag
attacgctggatgagttaaagacagtacctattttgctgcgcgaacgcggttctggctcg
ctggaagttatcgaacacgcgcttcggggtgtgggccttcgcctgaccgatctgaccgta
gaaatgcagttaggtagtaccgaaagcattaagtcttacctgggcagttcgcggtgcatg
gcttttgtatcgatcttcgccgtacaggacaaagtacgaaccggcatcctgaaggtgctc
gatgtacaagggctttccatccagcgggaattttattcaattcagctgcaaggcgttacg
gaagggctggccgatacattcatgcgcttcgcccggcagcactacaagcgaaactaa
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