Spirosoma oryzicola: LQ777_21540
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Entry
LQ777_21540 CDS
T08981
Name
(GenBank) TCR/Tet family MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_21540
01504 Antimicrobial resistance genes [BR:
soq01504
]
LQ777_21540
Transporters [BR:
soq02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LQ777_21540
Antimicrobial resistance genes [BR:
soq01504
]
Gene variants
Tetracycline resistance genes
Transporters
LQ777_21540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
DUF5455
Motif
Other DBs
NCBI-ProteinID:
UHG90814
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Position
5109056..5110279
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AA seq
407 aa
AA seq
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MRNRTAPALVFIFITLLIDVTGLGIIIPVFPKLIEQLIHGNISQAAHWGGLLTSSYALVQ
FLFSPVLGGLSDRFGRRPVLLFSLFGFGLDYILQGFAPTIGWLFLGRIVAGITGASFTTA
TAYIADISPPEKRAQNFGLVGAAFGVGFILGPALGGFLGQFGPRVPFFVSAGLTLLNFLY
GFFILPESLAPEKRRPFEWRRANPISSLMRLGKYPVILGLVASLVLIYIAGFAVQGTWTF
YTMEKFKWDEKTVGLSLAAIGVSFAIVQGGLSRIIIPKLGQQRSVYVGMLFSAIGFALFA
LANQSWMMFAFMAVYAMGGIAGPSVQGIISNQVPDNEQGELQGALTSLTSTTSIFGPFIM
TNLFSYFTSANAPVYLPGAPFLLGSVLILISAVLARRGLNRSRVAVS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaccgcacagcgccagccctcgtctttattttcatcacgcttctcatcgacgta
acgggactgggtattatcatccctgtttttccaaaactgattgagcaacttattcacggc
aacatcagtcaggcagcccattggggtggattgcttacatcctcttacgccctggtgcag
tttcttttctctccggttctcggcggactgagcgaccgttttggccgtcggcctgtgctg
ctgttctcgctctttggcttcggtcttgattatattctgcaaggctttgctcctactatt
ggctggttgtttttggggcgaatcgtcgcgggtattaccggagccagttttaccacggcc
acggcttacattgccgatattagtccacccgaaaaacgagcgcagaattttggattggtt
ggcgcagcttttggcgtcggtttcatcctgggtccggcactcggtggtttcctggggcag
tttggtccacgcgtaccttttttcgtgtcagccgggttgaccctgcttaatttcttgtac
ggcttttttatccttccagaatcgctggctcccgaaaagcgccgaccgttcgaatggcga
cgcgctaatcccataagctcgctgatgcggttgggaaagtatcccgttattctgggtttg
gttgcatcgctggtgttgatttacatcgccggatttgccgtacaaggtacctggacattc
tacacgatggaaaaattcaagtgggatgaaaaaacggtcggcttatccctggccgcgatt
ggcgtatcgttcgcgatcgtacagggtgggctaagtcgaattatcattcctaagctaggc
cagcagcgctctgtgtacgtggggatgctgttcagtgctattgggtttgccttgtttgcc
cttgccaaccaaagctggatgatgtttgctttcatggcggtgtatgccatgggcggtatt
gccgggccatctgttcaaggcatcatttccaatcaggttcctgataatgaacagggcgag
cttcagggggctttaacgagcctaaccagcacaacgtcgattttcggtccgtttattatg
acgaacctgttttcgtacttcacgtcggccaatgctcctgtttaccttccgggagcccca
ttcctactaggctccgtgttgattcttatcagtgctgttctggcccgccgtggtttgaat
cggtcacgggtcgcggttagttaa
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