Spirosoma oryzicola: LQ777_21825
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Entry
LQ777_21825 CDS
T08981
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00470
D-Amino acid metabolism
soq00550
Peptidoglycan biosynthesis
soq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LQ777_21825 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQ777_21825 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
LQ777_21825 (murD)
Enzymes [BR:
soq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LQ777_21825 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
soq01011
]
Precursor biosynthesis
Amino acid ligase
LQ777_21825 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
DAO
Pyr_redox_3
FAD_oxidored
DUF746
DUF5127
3HCDH_N
CbiA
Motif
Other DBs
NCBI-ProteinID:
UHG90870
LinkDB
All DBs
Position
complement(5169605..5170957)
Genome browser
AA seq
450 aa
AA seq
DB search
MVAKKIAVLGGGESGVGAALLAQAKGFDVFLSDKGSLKESYRATLRAAGIPFEEGEHTEE
KILDAVEVVKSPGIPATVPLVQKLKAQGTPVISEIEFAARYTNAKLIGITGSNGKTTTTL
LIYHLLKKAGLNVGLAGNVGDSFAAQVIDGSFDYYVLELSSFQLDDMVDTHLDVMVLLNI
TPDHLDRYGYNFQNYIDSKFRILQNAQPSDTFIYFEESQPILDELAKRNPSVNKLPISLQ
ATPSPGGFFQNGQLTATLGDSSFQMAMTDTTLRGPHNAINTLAAVLAAKAVGIDNESITE
GLKTFQNAAHRLEPAGTINDVQFINDSKATNVDSVFYALSSMEAPTIWIAGGQDKGNDYS
QLDEVVSRKVKALICLGIDNQKLINYFGNKIPAIYETQQITDAVAKGLEWAQPGDAVLLS
PACASFDLFKNYEDRGNQFKAAVQKLIDEV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaaagaaaatagcggttcttggcggaggagaaagcggagtaggggcggcctta
ttagcccaagcaaaagggtttgacgtttttttgtcggataagggctctttgaaagaaagc
taccgggctacgctgcgagccgctggtattccgtttgaagaaggagaacataccgaagaa
aagattcttgacgctgtagaagtcgtgaaaagccccggcattccggcaacggtgccgctg
gtgcaaaagctgaaagcacaaggtacaccggttatttcggagattgagtttgctgctcgt
tacacgaacgccaagctgatcggaatcacaggcagcaatggaaaaacgacaacgacgctg
ctaatctatcatttgctgaaaaaagcggggctaaatgtcggactggcgggcaacgtaggc
gatagttttgccgctcaggtgatcgacggttcgtttgactactacgtgttagagttgagt
agtttccagctggatgatatggtcgatacccatctcgatgtgatggtattgcttaatatt
acacctgatcacctggaccggtacggctacaactttcagaattacatcgattcaaaattc
cggattttacagaacgcccagcccagtgatacgttcatttactttgaggaaagtcaacct
atcctcgatgaactggcgaagcgtaatccatcggtaaataagctgccgatttcgctgcaa
gcaacacccagtccaggtgggttctttcagaatgggcagctaaccgcaacattgggcgat
tcatcgttccagatggcaatgaccgataccacgctccggggaccacacaacgctatcaat
acgttggcggctgtactggcggccaaagcggtgggtattgacaacgaatcgatcaccgaa
ggattgaaaacgttccagaatgccgcgcaccggctcgaaccagccggaacgataaacgac
gttcagtttatcaatgactcaaaagcaaccaatgtagactcggtattttatgcattatcg
agcatggaagcaccaacaatctggattgcgggcggtcaggataaggggaacgattacagc
cagctggacgaagtggtaagccggaaagtaaaagcgttgatttgcttaggcattgacaat
cagaaactcataaattacttcggtaacaagatacccgccatctacgaaacgcagcagatt
acggacgctgtggcgaaaggacttgaatgggcacagccgggagatgcggtactgttgtcg
cccgcctgcgctagtttcgatttgtttaagaactacgaagaccgggggaatcagtttaaa
gctgccgttcaaaaattaatcgatgaggtctag
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