Spirosoma oryzicola: LQ777_22370
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Entry
LQ777_22370 CDS
T08981
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_22370
Transporters [BR:
soq02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ777_22370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
PEGA
NOMO1-like_2nd
EMC7_beta-sandw
SdrD_B
fn3_3
SpaA
Motif
Other DBs
NCBI-ProteinID:
UHG90973
LinkDB
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Position
5308608..5310878
Genome browser
AA seq
756 aa
AA seq
DB search
MIVTLLVLTIPTLVRAQQPASRIEGTILLADGTPGSAATVQIKSLKRATTADNNGHFTLD
GLASGRYELQISMVGYKPTRQTVDVENNKSSTVIIRLKAAQNQLDEVVVTGQYEPQSMKK
SVYQVRVINSERIRLRGAVNVIGVLNNELGFRFSNDLMLGTTDVQLMGMSGRNVKILLDG
LPMVDRGDTRESLNQIDINSIERIEIVEGPMSVSYGSDALAGVINIITKKPGNERLGINA
RVQEETVGNEYSPFANQGLHLQTANVTWQKKGWNVSAGATNNTFGGWQGQATGRAKDWLP
KDQLFGHGKIGYRNENLTVYYRLDALKEDLLSQGIENVNTRQARDQRYITHRYVHQVQGD
WKLSERLQLNGQASYTDYQRRTQTTMLDLSTGRRTLSLGEGEQDVSIFTSQTYRATASYK
VSSVVSLQPGVDINLDGSSGARISGSPTINDYAFFVSSTINPTAKISIRPGLRFIKNSVY
NAPPAIPSLNAKFALSPRLDLRLAYARGFRSPALRELYFNFFDASHSIRGNPNLKAETSN
SINGSLVWQAGRQFKSTLGGFYNVFNNLISYGIDPSDPRVSMNINIDKFKTTGVTLENVF
TWKALQATVGFSYIGRYNNLLTATDTTNYVGGLPSFMWSPEVNTNLTYTLPTLDTKVSLF
YKYSGRRPSYQTTVTADNQVSATLTEIAPFHWADITLTKPIAKYLTLTAGAKNLFNITRL
ANTSTDTGIAHSSAGPVPLSYGRSYFLGLSFQWYKN
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtaacgctgctggtattgactatacctaccctggttcgtgcccagcaacccgct
agccgtatcgaaggaacaatcctcttagccgatggtacgcctggaagcgctgctacggta
cagatcaagtcgctcaaacgggccactacggcggataacaacggccattttacactagac
ggcttagcttcgggccggtacgaattacaaatctcgatggtcggctacaaaccgaccaga
cagaccgtcgacgtggaaaataataagtctagcaccgtcataatccgccttaaagccgct
cagaatcaactggacgaagtggttgtaacagggcaatacgagcctcaatcgatgaaaaaa
tcggtctatcaggtacgggtaatcaacagtgaacgcattcgtttacggggggccgtcaac
gtgatcggcgtcctgaacaatgagttagggtttcgcttttcgaacgaccttatgctaggt
acaaccgatgttcagctgatgggtatgtcgggccgaaacgtaaagattctactggatggc
ttaccaatggtagaccggggcgacacccgcgaaagcttaaaccagatcgatattaattca
atcgagcggattgagattgtagaaggcccgatgtcggtttcgtacggttcggatgcgctg
gcgggggttatcaatatcattaccaaaaaaccgggcaacgaacggcttggcattaacgct
cgcgttcaggaagaaaccgttggtaacgagtacagccctttcgccaaccaaggcttacac
ctccagacagcgaatgttacgtggcagaagaaaggctggaacgtatcggctggagctacg
aacaataccttcggcggctggcagggacaagccactgggcgcgctaaagactggcttcct
aaagaccaattatttgggcatggcaaaatcggctatcgcaacgaaaacctgactgtgtat
taccggctggatgcgctgaaagaggacttactaagccagggtattgagaatgtcaacacg
cgtcaggcccgcgaccagcggtacattacccaccgttacgttcatcaagtacagggcgac
tggaaattgagcgaacgtttgcaactcaatggacaagcgtcttacacggactaccaacgc
cggacccagacaacaatgctggatctgagtacaggccgacgcacgctttcgctgggcgaa
ggcgaacaggacgtgtctattttcactagccagacctaccgcgctacagcttcgtacaaa
gtttcgtcggtagtttctttacaacccggcgtcgatatcaatctggatggcagttccgga
gcgcgaatttcaggatcacccaccatcaatgactacgctttttttgtctcttcgacaatc
aatccaaccgcaaagattagcatccgtccgggtttacgcttcatcaaaaactcagtctac
aacgcaccaccggctattccttccctgaacgccaaatttgcgctttctccccgactggat
ttacgcttagcgtacgcacggggttttcgctcacctgccctgcgcgaactgtatttcaac
tttttcgatgccagtcactctattcgcggcaatccgaatttgaaagcggaaacctcgaat
agtatcaatggatcgctggtgtggcaggcaggtcgtcagtttaaatcgacgcttggcggt
ttctataacgttttcaataacctgatcagctacggaattgacccaagcgacccgcgcgtt
tcgatgaatatcaacatcgacaagtttaaaacgaccggggtaacgctggagaatgtcttt
acctggaaagcgcttcaggcaacggttggcttctcctacattggtcgctataataatttg
ctgacggcaacggacaccacaaactacgtaggcggcttaccctcgtttatgtggtcgccg
gaagtaaatacgaaccttacgtatacgctaccaacgcttgacaccaaggtcagccttttc
tataaatactccggcagacggccaagctatcagactactgtaacggcggataatcaggta
tcagcaacgctaactgaaatagcgccattccactgggccgacatcacattgacaaagcca
atcgccaagtatctgactcttaccgcaggcgctaagaacctgttcaatatcacccggctg
gccaacacatcaaccgatacgggtattgcccatagttcggcaggaccagtaccgcttagt
tacggacgttcttattttctggggcttagcttccagtggtacaaaaactaa
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