Spirosoma oryzicola: LQ777_22460
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Entry
LQ777_22460 CDS
T08981
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00260
Glycine, serine and threonine metabolism
soq00630
Glyoxylate and dicarboxylate metabolism
soq00785
Lipoic acid metabolism
soq01100
Metabolic pathways
soq01110
Biosynthesis of secondary metabolites
soq01200
Carbon metabolism
Module
soq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LQ777_22460 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LQ777_22460 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LQ777_22460 (gcvP)
Enzymes [BR:
soq01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LQ777_22460 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UHG90991
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Position
complement(5330319..5333237)
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AA seq
972 aa
AA seq
DB search
MKLNLRYQESFEDRHHGQTDSAHAEMLQTISATGLPVESIDELIDQTVPATIRLPRPLDL
PAPKSETQFLADFKKLAGQNKVFKSYIGTGYYDTITPNVILRNILENPAWYTAYTPYQAE
IAQGRLEALLNFQTVVSDLTGMDLANASLLDEATAAAEAMHMLYAMRPAAKKTASTFFVS
ERCHPQTIDVILTRATPIGINVLVGDHRSVDLTNAEIFGVLLQYPASDGEVFDYTDLISA
AHELGITVAVAADLLALTLLTPPGEMGADVVVGSAQRFGVPMGFGGPHAAYFATRDAFKR
QIPGRIIGVSQDAEGKPALRMALQTREQHIRREKATSNICTAQVLLAVMAGSYAVYHGPQ
RLRTIGEKVHALAKTFATALRWSAHELSTENYFDTVTVKVGDVESIKKSARASQINLRYL
PDGEHVSVSFDETKTVDDVLELMSIFGVKCDLDAIIDSLEITWPERLVRQSDYLTHPVFN
THHTEHEMLRYLKSLEEKDLSLVHSMISLGSCTMKLNATAEMIPVTWPEFGKLHPFAPKD
QTLGYQQLFSDLNDWLCEITGFAAMSLQPNSGAQGEYAGLMVIRAYHESRGDHHRTVSLI
PQSAHGTNPASAVMAGMKVVIVKCDERGNIDVADLKAKAEQYSNDLSCLMVTYPSTHGVF
EESIKEICEVIHQHGGQVYMDGANMNAQVGLTSPATIGADVCHLNLHKTFCIPHGGGGPG
MGPIGVAAHLAPFLPGHALVQTGGDQAIHAVSAAPYGSASILVISYAYIAMMGSEGLTNA
TKRAILNANYIKARLNGHYDTLYTGANGRAAHEMIVDCRPFKAAAGVEVEDIAKRLMDYG
FHAPTVSFPVAGTLMIEPTESESKAELDRFCDAMIAIREEIREIETGVAERNSNVLKHAP
HTATVALADNWNRPYSREKAVYPLPYVQARKFWPSVSRIDSAYGDRNLVCSCVPTDAYAT
EVAEEAGMEQQA
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaaccttcgttaccaggagtcatttgaagaccgtcaccacggtcaaaccgat
tcggctcatgccgaaatgctccaaaccatttcagcgaccggcttaccggttgaatccatc
gacgaactaattgaccagacggttccggctaccatccggctcccccgaccccttgatctg
cccgcgcctaaatcggagacgcaattcctggcggatttcaagaagctcgctggccagaac
aaggttttcaaatcgtatatcggtaccggttactacgataccattacaccgaacgttatt
cttcggaatattctggaaaacccggcctggtataccgcttacacgccttaccaggccgag
attgcacaagggcgtctggaagcgttactcaatttccagacagtagtatctgacctaaca
ggtatggatctggcaaatgcctcgctgttagacgaagcgactgccgcagccgaggccatg
cacatgctgtacgcgatgcgtccggcggccaaaaagacagcgagtacgttctttgtttcg
gagcgttgccatccgcaaacgatcgatgttatcctgacccgtgcgacgccaataggaatc
aacgtactggttggcgatcaccgttcggtcgatcttacgaacgccgaaattttcggcgtt
ctgcttcagtatccggcttctgacggcgaagtattcgattatacagatcttatttcggca
gcgcatgaattgggcatcacggtagctgttgccgccgatctgctggctctgacgctgcta
acccctcccggcgaaatgggcgctgatgtggtcgttggttcggcgcagcgctttggcgtt
ccgatgggttttggtggcccacacgcggcttacttcgcgacccgcgatgcgttcaaacgc
cagattcccggtcggatcatcggtgtttcgcaggatgccgaaggtaaaccagcgttacgg
atggctctgcaaacgcgtgagcagcacatccggcgcgaaaaagcgacatcaaacatttgt
acggcacaggttctgctggccgtcatggcgggtagttacgcggtgtaccacggtccgcaa
cggctccggacgattggcgaaaaagtacacgcgctggcaaaaaccttcgcgacagcgcta
cgctggagcgctcacgagcttagcaccgaaaactatttcgatacggtaaccgtaaaagtc
ggtgatgttgagtcgatcaaaaaatcggcgcgggcgtcgcagataaacctacggtatttg
cccgatggtgagcatgtcagcgtgtcgtttgatgaaacgaagaccgtagacgacgttctt
gaactgatgtcgatctttggcgtaaaatgcgatctcgacgcgattatcgatagcctggaa
atcacctggcctgagcgccttgttcgtcagtccgattatttgacgcacccggttttcaat
acgcatcataccgagcacgaaatgctgcgttatctgaagtcattggaagagaaagacctt
tcgctggttcattcgatgatttcactcggtagctgcacgatgaagctgaatgctactgcc
gaaatgattccggtaacctggcctgaattcggcaaactgcatccatttgcgccaaaggat
cagacgttgggctatcaacagcttttcagcgatctaaacgattggctgtgcgaaatcacg
ggttttgccgctatgtcgctgcaaccaaactccggtgcgcagggcgaatacgctggtttg
atggtaattcgggcttaccacgaaagccggggcgatcatcaccgtacggtatcgttgatc
ccgcagtcggcgcacggtaccaaccccgccagtgccgttatggcaggtatgaaagttgtg
atcgttaaatgcgatgagcgtggcaacattgatgtcgcggatctgaaagcaaaagctgaa
caatacagcaatgatctgtcgtgtctgatggtgacctatccatcgacgcacggtgttttt
gaggaaagcattaaagaaatctgcgaagttattcaccagcatggtggccaggtttacatg
gacggtgccaatatgaatgcgcaggtcggtctgacctcacccgcaacgattggggccgat
gtgtgtcacctgaatttgcacaagacgttctgtatccctcacggtggtggcggccctggt
atgggaccaatcggtgtggcggcccatctggctccgttcctgcccggtcatgcgcttgtg
caaacgggtggcgatcaggcaattcatgcggtgtcggcagctccgtacggttcggccagt
attctcgtcatttcctacgcgtacattgccatgatgggtagcgaaggattgaccaacgct
acgaagcgggctatcctgaatgcgaactacatcaaggcgcggctgaatggtcattacgat
acgctatacaccggagccaatggccgggctgcgcacgaaatgatcgttgattgccgtccg
ttcaaagcggctgcgggcgttgaagttgaagatattgctaagcggttgatggattacggg
ttccacgcgccaacggtttcgttcccggtagccggaacgttgatgattgaaccaaccgaa
tccgaatcaaaggccgagcttgaccgcttctgcgatgcgatgatcgccattcgtgaagaa
attcgcgaaattgaaacgggcgttgctgagcggaatagtaacgtgctgaaacatgcaccg
cacacggcaacggtggcattagctgacaactggaaccggccttactcgcgtgagaaagcc
gtttatccattgccatacgtgcaggctcgcaaattctggccgagtgttagccggattgac
tcggcgtacggtgaccggaatctggtttgttcctgcgtaccaacggacgcttacgcaaca
gaagttgctgaagaagccggtatggaacagcaagcctaa
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