Spirosoma oryzicola: LQ777_22830
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Entry
LQ777_22830 CDS
T08981
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
soq
Spirosoma oryzicola
Pathway
soq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LQ777_22830 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_22830 (ruvB)
Enzymes [BR:
soq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LQ777_22830 (ruvB)
DNA repair and recombination proteins [BR:
soq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LQ777_22830 (ruvB)
RecFOR pathway proteins
LQ777_22830 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_16
AAA_22
TIP49
AAA_14
NB-ARC
Mg_chelatase
nSTAND3
Bac_DnaA
NPHP3_N
NTPase_1
RNA_helicase
AAA_33
TsaE
AAA_PrkA
TniB
AAA_18
Rad17
DUF815
AAA_24
Sigma54_activ_2
bpMoxR
ABC_tran
NACHT
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UHG91060
LinkDB
All DBs
Position
complement(5418112..5419140)
Genome browser
AA seq
342 aa
AA seq
DB search
MRNDFLKGTGEGMSATDKEIERALRPLSFEDFTGQAKVLDNLEVFVQAAKQRGDALDHVL
LHGPPGLGKTTLSHIVANELNANIKMTSGPVLDKPSDLAGLLTNLQPNDVLFIDEIHRLN
PIVEEYLYSAMEDYKIDIMLDSGPNARTVQIKLNPFTLIGATTRAGMLTSPLRARFGISC
RLEYYDAQLLTSIVQRSSAILGTAIDEQGAFEIARRSRGTPRIANNLLRRTRDFAQVKGN
GYINVDIAEIALSALEVDQNGLDDMDIRILTTIIEKFKGGPVGLSTIATACSEESETIEE
VYEPFLIQEGFLKRTSRGREATERAYLHLGIVPPYKNGELFG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacgactttctgaaagggacaggcgagggaatgtcggctaccgataaagagatc
gaacgggcgctccgaccgctttcgttcgaggactttacggggcaggctaaagtgctggac
aaccttgaagtatttgttcaggcagccaagcaacggggcgatgcactcgaccacgttttg
ctccacggccctccggggctgggcaaaacaacgctgtcgcacatcgttgccaacgagctt
aatgcaaatatcaaaatgacgtcggggccggtactggacaaaccaagtgacctggcggga
ctgctaacaaacttgcagccaaacgacgtgctgtttatcgacgagattcaccggctcaac
cccatcgtggaagagtatctgtactcggcgatggaggattacaaaattgacattatgctc
gattcaggtccgaacgcgcggactgtacagatcaagctgaatccgtttacactcattggc
gctaccacccgtgccggtatgctgacatcaccgttacgggcgcgtttcggtatcagctgt
cggctggagtattacgacgcacagctgctgaccagtatcgttcagcggtcgtcggcgatc
ctgggtacagcgattgatgagcaaggagcttttgagattgcccgccggagccggggaaca
ccccggattgccaataacctgttgcgtcgaacccgcgattttgcgcaggtgaaagggaat
ggctacatcaatgttgatattgctgaaattgccttgagcgctcttgaagtagaccagaac
ggtttggacgatatggacatccggattttgactacgatcatcgaaaagttcaagggagga
cccgtcgggctttcgaccatcgcgacagcttgcagtgaagagtccgaaacgattgaggag
gtttacgagccgtttttgattcaagaaggttttctaaaacgtacctcacgcgggagggag
gctacagagagagcgtatctccacttaggcatcgttcctccttacaagaatggggagctc
tttggctaa
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