KEGG   Spirosoma oryzicola: LQ777_22870
Entry
LQ777_22870       CDS       T08981                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
soq  Spirosoma oryzicola
Pathway
soq00010  Glycolysis / Gluconeogenesis
soq00020  Citrate cycle (TCA cycle)
soq00260  Glycine, serine and threonine metabolism
soq00280  Valine, leucine and isoleucine degradation
soq00310  Lysine degradation
soq00380  Tryptophan metabolism
soq00620  Pyruvate metabolism
soq00630  Glyoxylate and dicarboxylate metabolism
soq00640  Propanoate metabolism
soq00670  One carbon pool by folate
soq00785  Lipoic acid metabolism
soq01100  Metabolic pathways
soq01110  Biosynthesis of secondary metabolites
soq01120  Microbial metabolism in diverse environments
soq01200  Carbon metabolism
soq01210  2-Oxocarboxylic acid metabolism
soq01240  Biosynthesis of cofactors
Module
soq_M00009  Citrate cycle (TCA cycle, Krebs cycle)
soq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
soq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
soq_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:soq00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LQ777_22870 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LQ777_22870 (lpdA)
   00620 Pyruvate metabolism
    LQ777_22870 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LQ777_22870 (lpdA)
   00640 Propanoate metabolism
    LQ777_22870 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LQ777_22870 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LQ777_22870 (lpdA)
   00310 Lysine degradation
    LQ777_22870 (lpdA)
   00380 Tryptophan metabolism
    LQ777_22870 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LQ777_22870 (lpdA)
   00670 One carbon pool by folate
    LQ777_22870 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:soq04147]
    LQ777_22870 (lpdA)
Enzymes [BR:soq01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LQ777_22870 (lpdA)
Exosome [BR:soq04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LQ777_22870 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO GIDA FAD_binding_2 HI0933_like FAD_oxidored NAD_binding_8 Lys_Orn_oxgnase Thi4 Amino_oxidase 3HCDH_N FAD_binding_3 AlaDh_PNT_C 2-Hacid_dh_C DUF7638
Other DBs
NCBI-ProteinID: UHG91068
LinkDB
Position
complement(5431668..5433068)
AA seq 466 aa
MAAQYDVIVVGSGPGGYVAAIRASQLGMKTAVIERESLGGICLNWGCIPTKALLKSAQVF
EYIKHSADYGITVSGESQADFGAVIKRSRGVADSMSKGVQFLMKKNKIDVISGVGKVKPG
KKVDVTAADGKVTEYEAKHIIIATGGRARQLPSVPIDGTKVIEYRKAMTLEKRPDSLLVI
GSGAIGVEFAYVYASMGTKVTIIEFLPNVVPVEDEDISKELAKQYKKLGVDIYTKSEVTK
VDTSGQGCKVFVKTPDGEKTFDVDVVLSAAGVVANIENIGLEEVGINVDRGKIVTDDYYR
TNVEGYYAIGDVTKGQALAHVASAEAIICIEKIAGQPHVEPLNYNNIPGCTYCTPEIASV
GYTEKAAREAGYELKVGKFPFTASGKAKAAGTPEGFVKVIFDAKYGEFLGAHFIGNNVTE
MIAEVVAARKLETTGEEILKAVHPHPTMSEAIKDATEAAYGEAIHL
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggctgcacagtacgatgtaatcgttgtgggtagcgggccgggcggctatgttgccgct
atccgggcgtcgcagttgggtatgaaaacggccgtcattgagcgcgaaagcctcggcggc
atctgtctgaactggggctgtatccctaccaaagcgctgcttaaatcagcgcaggttttt
gaatacattaaacactctgccgattatggaattacggtttcgggcgagtcgcaggccgat
tttggggctgtgatcaagcggagccggggcgttgccgacagcatgagcaagggcgtccag
ttcctgatgaagaaaaataaaatcgacgtcatcagtggtgtcggtaaggtgaagccgggc
aagaaagtagacgtaacagccgccgatggtaaggttaccgaatacgaagccaagcatatc
atcatcgctaccgggggccgtgcccgtcagttgccatccgtccccatcgacggtacgaaa
gtaattgagtaccggaaagcaatgacgctcgaaaagcggccagattccctgctggtgatc
ggttcgggtgccatcggtgtcgagttcgcttacgtgtatgcgagcatggggaccaaagta
accattatcgagttcctgccgaacgtagtgcccgtcgaagacgaggacatctccaaagag
ctggccaagcaatacaaaaagctgggcgtcgacatttataccaaatcggaggtaacgaaa
gtagacacaagcggtcagggctgcaaagtattcgttaaaacgcccgatggcgaaaagaca
ttcgacgtagatgtggtgttgtcagcggctggtgtcgtagccaacatcgaaaacatcggt
cttgaagaagtaggcatcaacgttgaccggggtaaaatcgtgaccgacgattactaccgg
acgaacgttgaaggctattacgccatcggcgatgttacaaaagggcaggcattggcacac
gttgcatcggccgaagccattatctgcatcgagaaaatagccggacagccacacgttgag
ccgctcaactacaacaacattccgggttgtacgtactgcacgcccgaaatcgcgtcggtt
ggctatacggagaaagctgcccgcgaagcggggtatgagctgaaagtcggtaagtttcct
ttcacagcatcgggtaaggcaaaggctgccggtacacctgaaggctttgtgaaggttatt
ttcgacgcgaaatacggcgagttcctgggcgctcacttcatcggtaacaacgtaaccgag
atgattgccgaggtcgtagctgcccgtaagctggaaacgactggcgaagagattcttaaa
gccgtccacccgcacccaaccatgtcggaagcaatcaaagatgctaccgaagcggcctac
ggtgaagcgattcacttataa

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