Spirosoma oryzicola: LQ777_23460
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Entry
LQ777_23460 CDS
T08981
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00970
Aminoacyl-tRNA biosynthesis
soq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LQ777_23460 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
soq03029
]
LQ777_23460 (gatB)
Enzymes [BR:
soq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
LQ777_23460 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
LQ777_23460 (gatB)
Mitochondrial biogenesis [BR:
soq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LQ777_23460 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YqeY
DUF6505
Endotoxin_N
Motif
Other DBs
NCBI-ProteinID:
UHG91173
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All DBs
Position
5551153..5552658
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AA seq
501 aa
AA seq
DB search
MVAEANSSPEVLAQAAKTRYEAVIGLEVHCQLLTQSKIFAADANAFGAEPNTNISVITLA
HPGTLPKLNRKAVEYAVRMGLACGSEITRHNIFARKNYFYPDLPKGYQLSQDKGPVCVGG
GITVKAKHPETGQLYQTTIQLHHIHLEEDAGKSIHDGDEWATQLDYNRAGTPLIEMVTEP
CIRTADEAGQYLTEVRRLVRYLDICDGNMEEGSLRCDVNVSIRPIGTTTLGTKVEVKNLN
SIRNVMRAVDSEFQRQVDVIESGGRITQETRTFDAATGLSYAMREKETMNDYRYFPDPDL
TPVVISDAWLADIQTKMPVLPAELYQKFTAHYGLPDYDAALLTDSKELAEYYEAICAHTA
NYKAASNWVMGPVKGQLNEKALRERQFPISAERLASLITLIDNGTISQTAAQQVFTLMVA
EPTATAIDLAQTQGLIQNRNTDALQSLVEEVLAAWPDKVAQYRKGKKNLLGMFVGEVMKK
SKGSADPKLVNELVTKTLQTT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggtagccgaagcgaactcatcgccagaggtgctggcacaagcagccaaaacccgctac
gaagcggtcattggccttgaggtacactgccagctattaacccaaagcaaaatttttgct
gccgacgcgaatgcgttcggtgctgagccgaataccaatattagtgttattacgcttgcc
catccaggcacgctgccgaagctaaaccgcaaagcagttgagtacgccgttcggatggga
ttggcttgcggtagcgagattacacgccacaacatttttgcccgcaaaaattatttttac
ccagacctacccaaaggttatcagctttcgcaggataaaggcccggtttgtgtagggggt
ggcattacggtaaaggccaagcatcccgaaacgggccagttgtatcagacaaccatccag
ttacaccacatccatctggaagaagatgctggaaagtcaattcacgatggcgatgaatgg
gcgacgcagctcgattacaaccgtgctggtacaccactcattgagatggttacggaacct
tgcatccgaacagccgacgaagcaggccaatacttaactgaagttcgacgactggtacgg
tatttggacatctgtgatggaaacatggaagaaggctcgctccgttgcgatgtcaacgtt
tcgatccgaccgataggaacaactacattagggacgaaggttgaggttaaaaacctaaac
tcgatccgaaacgtaatgcgcgccgtcgatagcgagtttcaacggcaggttgacgtcatt
gaatcggggggacgcattacgcaggaaacccgtacgttcgatgccgctacgggtctaagc
tacgccatgcgtgagaaggaaacgatgaacgattaccggtattttcccgatcctgacctt
actcccgtcgttatttcggacgcgtggctggcggatatccagacaaaaatgccggtgctt
cctgctgagttgtaccaaaagttcacggcccactacgggctgcccgactacgatgcagct
ttactgactgattccaaagaactggccgaatactacgaagcaatttgcgcccatacggcc
aattacaaagcagcttccaactgggtcatgggcccggtgaaaggccagcttaacgagaag
gccctacgcgaacggcagtttccgatttcggcagaacgcttagcatcactgattaccctc
attgataacggaacaatcagtcaaaccgctgcgcagcaggtatttacgttgatggttgcc
gagcctactgctacagcaatagatttggctcaaacacagggtttgatacagaatcgcaat
actgacgcgttacaatcgttggtagaagaagtactggcagcctggccggataaagtagcc
caataccgcaaaggcaaaaagaatttgctaggcatgtttgtgggcgaagtaatgaaaaaa
tcgaaaggctctgctgaccctaaattggtgaacgaactcgtaacgaagacattacaaaca
acatga
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