Spirosoma oryzicola: LQ777_23695
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Entry
LQ777_23695 CDS
T08981
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
soq
Spirosoma oryzicola
Pathway
soq02024
Quorum sensing
soq03060
Protein export
soq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LQ777_23695 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LQ777_23695 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQ777_23695 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
soq02044
]
LQ777_23695 (secDF)
Secretion system [BR:
soq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LQ777_23695 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UHG91220
LinkDB
All DBs
Position
5602826..5605897
Genome browser
AA seq
1023 aa
AA seq
DB search
MQNRTGILILTGVIAAICIYFLSFTFVSRSIKADAEAYATNKQGQFDRAKEQRYLDSLWK
EPVFLGSTLQEVTERELGLGLDLQGGMHVVLEVSPADILRSLSGNNRDPKFNEALKQAGE
DQKTSNTSFVDLFANNFKKLAPDTKLATIFATSANRSKINFQSSDTEVRKLLNDEVNGAF
GRAFQIIQARVDKFGVANPNIQRLPGSGRIQIELPGVDNPERIRRLLTGSAKLEFTEVYR
LNELAPAIEGMGSYLLREETARKATAKASTPATGTTAQGNSLESQLAQGSKKDSTSKSDT
AATSAQGTALTQLFLPVGQDQLGVYLKDTARANAVLNAPEVRSLFPADAVFAWDRKTFKA
TDGKEILPLYFLKKPGGRAPLEGDVITDATNDYDDRGRPEVTMNMNAEGARKWKSLTAAN
VGRPVAILLDNLVYTAPNVQNEIPNGRSSISGNFTVEETKDMSNVLKAGKLPAPTTIVEE
SVVGATLGSEAVSAGVLSSVVGILLVFGFVVFYYNRAGVIADIALLVNLFFLLGVMASLG
AVLTMPGIAGIVLSIGMAVDANVLIFERIKEELELGKTFKQAVSDGFKNALPSIIDSNVT
TFLTGIVLFIFGTGLILGFATTLIIGILTSLFAAIFITRLLLEYYIRNGKTLTFSSTWAK
KLFADSDFDFVSRRKLYYTISSVIIGAGIISVLFRGFGLGVDFKGGRSYVVRFEKAITTD
DVRNSLEGVLGASPEVKTYGGTGIGANQVKVTTSYLVDDNSAGADKRAEATIYKGLSSLK
GNPAHIESSQKVGPTIAYDILTSALWSILLAVAVVFVYILIRFKKLAFGYGAVVAMFHDV
LIILAIFSIFNGLLPFSLDVDQAFVGALLTIMGYSMNDTVVVFDRIREYLNENRGKKESI
PTIINNALNSTLSRTAVTGFSTILVLLVLFIFGGETIRGFSFAMLIGVIVGTYSSLFVAT
PIVVDALSNDQEKDNGTPTTIEKKTGFDAIPADFTSAEATTPEEFTAKKEKKAKTPLIRP
SQS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccgaaccggaatacttattctgacgggtgtaattgctgctatctgcatttac
ttcctgtcattcacgttcgtctcgcggagtatcaaagccgacgcggaggcttacgcaacc
aataaacaggggcagttcgaccgggccaaagagcagcgctatctggattcgctctggaaa
gagcccgttttcttaggcagcacgcttcaggaagttaccgagcgtgagcttggccttggc
cttgacctgcaaggcggtatgcacgttgtcctggaggtatcgccagcggatattcttcgt
agcctatccggtaataaccgcgatcctaaatttaacgaggctctgaagcaagctggtgaa
gatcagaagacaagcaacacgagctttgttgacctgtttgccaacaacttcaagaagctt
gctccagacaccaaactggctacgatcttcgcaaccagcgcaaaccgcagcaaaatcaac
ttccagtcgtccgataccgaagttcggaaattgttgaacgacgaagtaaacggtgctttt
ggccgtgcgttccagatcatccaggcgcgggtcgataagtttggcgttgctaacccaaac
attcagcgtttaccaggttcgggtcgtattcagatcgaactacccggcgtagacaatccc
gagcggatccgccgtctgttgacgggctcggccaaactcgaattcacggaagtataccgc
ctgaacgaactggctccagctatcgaaggcatgggttcttatctgttgcgtgaagaaacc
gctcgtaaagcgacggcaaaagcttctacaccggctacgggtaccaccgcgcagggcaac
agcctcgaatcacagttggcgcaaggttcgaagaaagattctacgtctaaaagcgatacc
gctgctacatcggcgcagggtacagctttaacgcagctattcctgcccgttggacaagac
caattaggggtttatctgaaagatacggctcgggcaaatgcggttctgaacgcacccgaa
gttcgtagcctgttccctgccgacgctgtttttgcctgggaccggaaaacgtttaaagca
acggacggaaaagagattctgcccctttacttcctcaagaaaccaggtggtcgtgcacca
ctggaaggtgatgtaattaccgacgctaccaacgactacgatgatcgtggccgtcctgag
gtgacgatgaacatgaacgcggaaggtgcgcgcaaatggaaaagcttaaccgctgctaac
gtgggtcgtccggtcgctatcttacttgacaacctggtttataccgcaccaaacgtacag
aacgaaattccgaatggccggtcgagcatctctggaaacttcactgttgaagagacgaaa
gacatgtcaaacgtactgaaagccggtaaactgccagcgccaacgacaattgtcgaagaa
agcgttgtcggtgctacgctaggttcagaagcggtaagcgccggtgtactttcatcggtt
gttggtatcctgctggtatttggctttgtcgtattctactacaaccgggccggtgttatt
gccgatatcgccttgctcgttaacctgttcttcctgttaggcgtcatggcttcgctgggg
gcggtattgaccatgccaggtattgccggtatcgtactgtcgattggtatggcggtggac
gcgaacgtacttattttcgagcggattaaagaagaactagagctgggtaaaacctttaaa
caagctgttagcgacggtttcaagaacgcactcccatcgattattgactcaaacgtaaca
accttcctgacgggtattgtcttgtttatcttcggtacgggtctgattcttggctttgcc
acaacgctgatcatcggtattctaacctcattgttcgcggctatctttattacgcgtctg
ctgttggagtactacattcgtaatggcaaaacgttgacctttagctcgacgtgggcaaaa
aaactgtttgccgattcggattttgatttcgtttctcgtcggaagctgtactataccatt
tcgtcggttatcatcggtgcgggtatcatttctgttcttttcagaggatttggtctaggc
gtcgatttcaaaggtggtcggtcctatgtggttcgtttcgaaaaagccattaccactgac
gatgttcggaattcactggaaggtgttttgggcgcatcaccagaggttaaaacttacggc
ggtacgggtattggcgcgaaccaggtaaaagtaacgacttcctatctggttgacgataac
tcggcaggtgctgacaaacgcgccgaagcgaccatttacaaaggtttgagcagcctaaaa
ggcaatccggcgcacatcgaaagttcgcagaaagttggaccgaccatcgcctacgacatt
ctgacatcggcgttatggtcgattcttttagcggtagcggtcgtctttgtgtacattctg
attcgattcaagaagctggcgttcggttacggtgcggtagtggctatgttccacgatgta
ctgattatcctcgctattttctcgattttcaacggcttactgcctttctcgcttgacgta
gaccaggcatttgtgggcgccttgctgacaatcatgggttactcgatgaacgataccgtc
gttgtcttcgaccggattcgcgaatacctgaacgaaaaccggggtaagaaagaaagtatt
ccaacgatcatcaacaatgcgttgaacagcaccctgagccgtacggcggtgactggtttc
tcaaccattcttgtcctgttggtactctttattttcggtggtgaaaccatccggggcttc
tctttcgcgatgctgatcggtgtcattgttggtacgtactcgtcgctgttcgtggcaacg
ccgattgtggttgacgccttgagcaacgatcaggaaaaagacaacggaacgccgacaacc
atcgaaaagaaaactggcttcgacgcgattccggctgacttcaccagcgcagaagcaact
acgcctgaagagttcactgcgaaaaaagagaagaaagcaaaaactccgcttattcgtcca
tcgcagtcatag
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