Spirosoma oryzicola: LQ777_24120
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Entry
LQ777_24120 CDS
T08981
Name
(GenBank) TetR/AcrR family transcriptional regulator
Organism
soq
Spirosoma oryzicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
HTH_10
HTH_40
Lysine_decarbox
Tox-ODYAM1
HTH_Tnp_1_2
HTH_11
HTH_22
HTH_7
HTH_5
HTH_23
TnsD
HTH_17
GerE
Sigma70_r4_2
UCH
Sigma70_r4
HAD_2
NUMOD1
SAM_LFY
HTH_24
DUF7646
Terminase_5
SpoIIID
HTH_19
CENP-B_N
HTH_Tnp_4
HTH_36
HTH_28
UPF0122
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
UHG91304
LinkDB
All DBs
Position
complement(5711297..5711944)
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AA seq
215 aa
AA seq
DB search
MKERIQAEAERLFWKYGVRSVTMEDIAKELGISKKTIYQHFTDKEQILYQVMLDKMVKNQ
SEMECMAIQTDNPVEEILHVLTVMQKQADKVSPNLLIDIKRYYPQAFTLFRQYKEQRIIQ
SILENIQKGVAQGLYRPDINPVIMARLRVEQIELAFNSDIFPTDQYSMLEIQHELTHHFV
RGMLTEKGFINYNHYVNHHKYDNNEYQADDTDLAA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcggattcaagcggaggccgagcgattgttttggaaatacggggtacgttct
gtgacgatggaagatatagccaaagaacttggcatttctaaaaagaccatttaccagcat
ttcaccgacaaagaacagattctataccaggttatgcttgataaaatggttaaaaatcag
tcagaaatggaatgtatggccattcaaaccgataaccccgttgaggaaattctgcacgtg
ctgacggtgatgcagaagcaggccgataaagttagccccaacttactgatcgatattaag
cgctattatccacaggcattcacgctttttcgacagtataaagagcagcgcattattcaa
tccatactcgaaaatattcaaaaaggtgttgcgcagggattatacagacccgacatcaat
cccgtcattatggctcgccttcgggtagagcagattgaacttgccttcaacagcgacatc
tttccaacggatcagtacagtatgctggaaatacagcatgaactaacgcaccattttgtg
cgcggtatgctaaccgaaaaaggatttatcaattacaaccactacgttaaccaccataag
tatgataacaacgaataccaggcggacgatactgatctggctgcttag
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