Spirosoma oryzicola: LQ777_25510
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Entry
LQ777_25510 CDS
T08981
Name
(GenBank) PAS domain S-box protein
Organism
soq
Spirosoma oryzicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
PAS_4
PAS
HATPase_c
PAS_8
HisKA
GAF
PAS_PdeA
GAF_3
GAF_2
Motif
Other DBs
NCBI-ProteinID:
UHG94100
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Position
unnamed2:26994..30917
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AA seq
1307 aa
AA seq
DB search
MASSFQHNGALEQQSADLLATQKLLRATLDATKDMIQVFEAVRNEQGEIVDFKWILNNHA
SEKIYGDVLGKSLLTLNPGVVAEGIFAAFKQVVETGVPQQYEKQYVHEQFDGWFHQSVVK
LNDGVTTTTSTITDRKQAQEQIKHSQAFLQSVIDSSLDIIQVFKAVRDETGNIRDFVWVM
NNQKALNQNGDVIGKSLLTINPGVVQTGIFDHMIEVAQTGVPYEHEQYYAHEQFSGWFYQ
ALVKTDDGVAMTTRDISRQKQAEQEILRLKDELTQQVTDKYQALFNSIDQGFNIIELIFD
DNGRVVDYWQREHNPVFTRMTGIKDAIGKRMSELVPYVEPEWHQMIQDIYYTGEPIRVDY
PVGALGQWFTAYMSRVGGEGSPLIACVYDDITERKQREQHQAFLLQLSDTLRTLDDFQTI
ENTSLQMLSDMLGIDRSYIATSTKGQDHTVVRAAYNPSSLTSLVGNYRMADFSEGIYWID
EQTLLIEDIATEPTLSELTRTSLKSIDLAALLSVSLREGEQPEMWSFVAANSKPRKWTKG
EVELIETVAERTWAAIERAKAEEALRRSEAHLATIFQAAQVGISEIDSTGRFTRVNDKLC
QLLGRSSADLLTMNVSDVTFADDIPTSEQALQQLIDTREPVSLDKRYVGADGKLVWANSS
ISLLPFLDKSPQTIVVITVDLTRRREAEESLRQSEERYRTLVENLPDYAIFRVGLDGLIS
EWLEGAQRLTGYAVDEIIGQPVSSLYTPEAQQAGDPTDELNEALQTGRAEHESLRIRKTG
EYFWVNEITTAIRQETGQVVGFTKISRDISRRKRAQETLRQHEQRTRLAVEAADMATWEW
QLITDEVYWNEQHFRLLGMEPQQEPVPSAVFISHIHPDDRSWVTAELLRVIAEQTLFDVE
FRIVRDDGGLRWLSGYGRVTKVEADVPVQISGVMLDVTERKEAEEALKRSEERLQKALSI
RTVGVIYFDLEGTIHDANDAFGRMSGYTRRDFIEGRVRWDELTPPEFMAVTRNAQQEYRL
KGENTPYEKQYRRPDGSHWWGLFAGKQLGKDDYIEFVLDISESKQAQQALEETDRRKDEF
LAMLAHELRNPLAPVRNGIQLLAQTHADDQVLGTLLPIMNRQMDHLLRMLDDLLDVSRIS
RGKIELRKERIDLTQVVNQAIDAIQTLYTDSGRQLSTQLPAYSLYVDGDATRLHQVVTNL
LTNGLRYTNQGGQVWLTLEPVGEQAILRVADNGIGIAAHQLDAIFELFVQADTSLARSHG
GLGLGLTLVKELTAMHGGRVEAHSEGLEQGSEFVVYLPILMAESVEK
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcttttcaacacaatggtgccctagaacaacagtctgctgacctgctagcg
acccagaaactgctcagagctactttggacgctaccaaagatatgattcaggtctttgaa
gccgtgcgaaacgagcagggtgagattgtcgatttcaaatggatactcaataaccacgct
tccgagaaaatctacggcgatgtacttggtaagagcctgttgacactcaacccaggtgta
gtagccgaaggtatttttgcggcctttaaacaagtagtcgaaactggcgtgccccaacag
tacgagaagcagtatgtccacgagcagtttgatggctggtttcatcaatccgtggttaag
ctgaatgacggggtgaccaccactacctccacgattaccgaccgcaagcaggcccaagaa
cagattaagcatagtcaggcatttttgcaatcggtcatcgacagctctctggatatcatt
caggtcttcaaagcggtacgggatgagacgggcaacatccgggactttgtctgggtcatg
aacaaccagaaagcccttaatcaaaacggggatgtcattggcaaaagcctgttaacaata
aatcccggcgtggttcagaccgggatttttgaccacatgatcgaggtagcccaaacgggt
gtgccttatgagcatgaacagtattatgcccatgagcagttttcgggctggttctaccag
gcactagtcaaaacagacgacggtgtcgccatgaccacccgcgatattagccggcaaaaa
caagccgagcaggaaattcttcgcctgaaagacgagctaacgcaacaggtaaccgataaa
taccaggctctttttaactccatcgatcagggattcaatatcatcgaactaatctttgac
gacaatgggcgcgttgtcgattactggcaacgagagcacaacccggtctttacccgaatg
acgggaatcaaagacgctatcggcaaacgaatgagcgaactggtgccttatgtcgagccg
gagtggcaccagatgattcaggacatctactacaccggtgagccgatacgcgttgactat
cccgtcggggcgcttggacaatggtttacggcgtacatgtcgcgggtgggtggcgaaggc
agtccgctgattgcctgtgtgtatgatgacattaccgaacgcaagcagcgggaacaacac
caggcgtttctgcttcagctatcggacaccttacgaacgctggacgactttcagaccatc
gaaaacaccagcctgcaaatgctctccgatatgctgggcattgatcgttcctacattgct
acttcgactaaagggcaagaccataccgtagttagagcggcttataacccaagtagtctg
acttccttggtaggcaattatcgaatggctgatttttccgaaggaatctactggatcgac
gaacagaccttacttattgaagatatagctacggagcctaccctttctgaattaaccaga
acatcgcttaagtctattgacctggcggccctactttcggtttcactacgcgagggagag
caacctgaaatgtggtcgtttgttgcagccaactccaagccgagaaaatggacgaaaggg
gaagtagagctaatcgaaacagttgctgaacgcacctgggctgcaatcgaacgagctaaa
gccgaggaagcccttcgccggagtgaagcccatctggcaactatttttcaggcggctcag
gtcggcatttctgaaattgactctacgggtcgatttaccagggtcaacgacaaattatgt
cagttgctgggccgctcgtcggcagacctgcttacgatgaacgtgagcgatgtaaccttc
gcggatgatattccgaccagtgagcaggcgctgcaacaacttatagatacccgagagccc
gtttcgctggataagcgatacgtcggagctgatggcaagctggtgtgggccaacagttcg
atctccctgctacccttcctggataagtcgccccaaaccattgtggttattaccgttgat
ttaacccgccgtcgggaggccgaagaatcgttacgacaaagtgaagagcgctatcggacg
ctggtcgaaaacctgcccgattatgccatctttcgggttgggctagatggactaatcagc
gagtggctggagggggcgcaacggttgacgggctatgccgttgacgaaatcatcgggcag
cctgtttctagcctgtatacaccggaagcgcagcaagcaggtgaccccacagatgaactg
aatgaagcgctgcaaacgggacgggccgaacacgaaagcctgcggattcgaaaaaccggg
gaatacttctgggtgaacgaaattacaacggccattcggcaggagacagggcaggtcgtc
ggctttaccaagatcagtcgggacatcagccgacgtaaacgggcacaggaaacgctccgc
caacacgagcaacgaactcgtctggccgtcgaagcagccgatatggcgacttgggagtgg
caactgatcaccgatgaagtgtactggaacgaacaacactttcgcctgctggggatggag
cctcagcaggagccggtaccttcagcggtattcatcagccatattcatcccgatgaccga
tcgtgggtaacggcggaattattgcgggttattgcggaacaaacgttgttcgatgtcgaa
tttcggattgtgcgcgatgacgggggattacgttggcttagtggctacggccgcgtgacc
aaagtcgaggccgatgttcctgttcagatcagcggggtcatgctggatgttaccgaacga
aaggaagccgaagaggctctcaaacgctccgaagaacggctacagaaagctttgtcgatc
cgaacggtaggtgtcatctactttgatttggaaggaactatccacgatgccaatgacgcc
ttcggacgcatgagtggctatacccggcgcgactttatcgaagggcgagtccgttgggat
gaactgacaccgcctgaattcatggccgtaacccgcaacgcccagcaggagtaccgatta
aaaggcgagaatacaccgtatgaaaagcagtaccgccgtccagatggaagtcactggtgg
ggcttatttgcgggcaagcagttgggaaaagatgactatatcgagtttgtcctcgacatc
agcgagagcaaacaggcccagcaggcgcttgaagaaaccgaccgccgtaaggatgagttt
ctggcaatgctagcccacgaattgcgcaatccgctagccccggtccgcaatggtatccag
ctactggcccagacccacgctgatgatcaggtgctgggaacgctgctgcccattatgaac
cggcagatggatcacttgcttcgaatgctggatgatctgctggatgtgagtcgcatcagc
cggggcaagattgagctgcgaaaagagcggatagatttgactcaggtagtcaaccaggca
atcgatgccatacagactctatatacggactccggtcggcagttaagcacacagctgcct
gcctattcgttgtacgtggatggcgatgcgacgcggttacaccaagtagtgaccaaccta
ctaaccaatggcctgcggtataccaaccagggaggacaagtctggctcaccctggagcct
gtcggggaacaagccatactgcgggtagctgacaatggcattggcattgccgcccaccaa
ttggacgccattttcgagctattcgttcaggccgatacatcgctagcccgctcgcatggt
ggcctgggtttaggcctgacgctggtaaaagaactaactgccatgcatgggggacgggta
gaagcgcacagtgagggccttgaacaaggcagtgagtttgtcgtatatttaccaatctta
atggctgaatccgtcgaaaaatga
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