Spirosoma oryzicola: LQ777_26405
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Entry
LQ777_26405 CDS
T08981
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_26405
Transporters [BR:
soq02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ777_26405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
Plug
fn3_3
EMC7_beta-sandw
ZirS_C
SdrD_B
TTR_TEN1-4
PEGA
DUF2846
PLipase_C_C
SpaA
Motif
Other DBs
NCBI-ProteinID:
UHG94270
LinkDB
All DBs
Position
unnamed3:complement(34547..36967)
Genome browser
AA seq
806 aa
AA seq
DB search
MKHLYSAFLSSLLVLTCLTAIAQSHGSVSGVVKTSDGNPAAFVNVSLKEARRGTITSEDG
TYQLKNVNPGSYTLQITFVGLQNQEKTITVKAGQTTTSDFSLAESTSQLSEVEVTGNNQV
VNLGKAGIAPLDLPQMTGVVSNVVITNQQASRLGDVLKNVSGVSLTQQRGGVAETFSARG
YSIGIAGAGGNIFKNGVISNTMGFPEASTLESVEVLKGSSALLYGNVSGGLIINMVTKKP
RFDFGGEVSMRVGSFGFYKPIIDLYGPIAKNLAFRVVGTYEKSNSYRDVVKTERVYVNPS
LLYKLGQKTTVLLQGDYLKSNLTPDNGIGSLNQNQDAIIPDVPRSRFINTNWAYNNVNQT
SGSLNIDHAFNTNWKLTVIGSAQGTNVTAFGAGVPNNNVAPNGDWTRSLSRTLTSEQDYT
GQVNLNGRFSTGSIGHQLLVGSDVVGVVSVSNSFTINYGAGKTAYDKINILNPNLYETRT
DIPDAIGTSKTTSPSVRNGIYVQDLISLSNKVKVLAGVRWSQQKTVQTTILNLLTGAETR
GTAETKTDAAFSPKVALLYQPTRNTSFFGSYANNFTINSGVDIYGQLLKPSIVDQFEAGV
KNELFNGRITANVGVYHIVNSDLAQMAPTKADGTPNADANVKEFTGQTTSDGLEIDFTGN
LSKNLYFITGYGYNYMRYTKASLVKGSPIEGERLTNNPAHTANATIFYTFDRSPLRGLKL
GASAFYTGNRYGGNNNQYGQTPAFSRLIPLTGFTTVDLSAGYGFRKVSVLAKVSNITNAL
NYLIHDRYSIMPIPPRQFTATVSYRF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatttatacagtgccttcctatcctctttactagtcttaacttgcctgacagcg
atagcccagtcgcatggctcggtgagtggcgtagtcaaaacgagtgacggtaatccggcc
gcttttgtaaacgttagcttgaaagaagcacgcagaggtacgataacatccgaagacgga
acgtatcagctaaagaatgttaaccccggttcatacacgttacagattacctttgtaggt
cttcaaaatcaggagaaaacgattaccgtaaaggctggacaaacaacgaccagcgatttt
tcattggctgaaagtacctcgcagctgagcgaagttgaggttacgggtaataatcaagta
gttaatctcggcaaagcaggtattgcgccactggacttaccccagatgacgggcgttgtc
agtaacgtggtgattaccaatcaacaggcgtctcgtctgggcgatgttctgaaaaatgtc
agtggtgtatcattgacgcaacagcggggtggtgtcgcggagacattttcggcccgtggc
tacagcattggtattgcgggtgctggcggaaatatcttcaagaatggcgttatctcgaac
accatgggcttccccgaagccagcacgctggaatccgttgaagtattgaaaggtagttcg
gctttgctttatggcaacgtatcgggcgggttgattatcaacatggttacaaagaaacca
cgtttcgattttggaggtgaagtttccatgcgggtcggcagcttcggtttttataaacct
atcatcgatttgtatggtccaattgccaaaaacctagcgtttagggtcgttggtacttac
gaaaaatcgaatagctaccgggatgttgtgaagacggagcgcgtttacgttaacccatcg
ttattgtataagcttggtcagaagactaccgttttactgcaaggtgattacctgaaatcg
aatctgacaccggataacggtattggctcgctgaaccaaaaccaggatgctattattcca
gacgttccccgttcgcgctttatcaacacaaactgggcatacaacaatgtcaatcagacg
tctggctcgctgaatatcgatcacgcgttcaatacaaattggaaactaaccgtcatcgga
tcagctcagggtacgaacgtaaccgcattcggtgcgggtgtaccgaacaacaatgtggcc
cctaacggagactggacacggtcgctcagccgcacgctcaccagtgagcaggattacacc
ggacaggtcaatctgaacggcagattcagcacaggatcaattggtcaccaactgctggtt
ggtagcgatgtggtcggcgttgtcagtgtcagcaactcgtttacaatcaattacggagct
ggcaaaacagcctacgataagatcaacatcctcaatccaaatctgtacgagacgcgcact
gacatcccggatgcaattgggactagcaaaacaacgtctccttcggttcggaacgggatt
tatgtacaggacttaatcagcctctcgaacaaggtaaaagtactggctggtgttcgttgg
tcacaacaaaagaccgttcagactacgattctcaacttgttgaccggagccgaaacgcgc
ggaaccgctgaaacgaaaaccgatgccgctttttcacctaaagtagcgttactctaccaa
ccaacccgcaacacgtcattttttggtagctacgccaacaacttcaccatcaatagtgga
gtcgatatttacggtcaactcctgaagccgtcaattgtcgatcagtttgaagcgggtgtc
aagaatgagctattcaatggacggatcacggcaaacgtcggcgtttatcacattgtcaac
agcgatctggctcagatggctccgacaaaagccgatggcactccgaatgccgatgcgaac
gtgaaagagtttaccgggcagaccaccagcgatggactggagattgattttacaggtaac
ctatccaaaaacctgtatttcatcaccggatacgggtacaactacatgcggtataccaaa
gcctcgttggtgaaaggctcgcccatcgaaggagagcggttgaccaacaaccctgctcat
acggctaatgctaccattttctacacgtttgatcggtcgcccttgcggggcttaaagctg
ggtgcttctgctttctacaccggcaaccgctatggtggtaataataaccagtacggtcag
acacctgcattcagccgtctgattccgctgacaggctttacaaccgttgacttgtctgcc
ggttatggcttccgaaaagtatcggttctggctaaagtgtcgaacatcacgaatgccctg
aactatttgatccacgaccggtacagtatcatgccaattcctccccggcagttcaccgca
acggtatcgtaccgattctaa
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