Spirosoma oryzicola: LQ777_27185
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Entry
LQ777_27185 CDS
T08981
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
soq
Spirosoma oryzicola
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
GAF_2
AAA_5
GAF
GAF_3
AAA
HTH_8
Mg_chelatase
AAA_3
AAA_2
AmiR_N
AAA_7
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UHG94409
LinkDB
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Position
unnamed4:complement(17424..19955)
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AA seq
843 aa
AA seq
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MLPANERTPLPSLLIVEDEFLIANDLRRILTKGGYQIDGIAGSVEEAKGQIASKRPDIVL
LDIFLDGHETGIDLAHRLNKQAIPFVFLSANLTDGLLEEAKVTQPFGFLTKPFREKDVLS
TLEIARYRYAHSEESKLRQQQSIQIAVNNASINMQDREQFCLAIADQINRFVPFSFFTLQ
IGLPEESSFYWLMLKKNADNTFSKISLITLLQDEADESFLKKLDQEAPDQLSEKTGVFSG
ETFNQLCQSYVTARAYRDKFNVRSLALFPISLKRNAVTTITLSSTLTDGFSAKDYQTVDL
ICPQIALTLDNLLAYQELDTRRQIKAIELAVANAFRSEASMSAILVLVAQAINELLPVDL
LALYRINGLQTSGADILSTVQKIKGRFEPLDSQSLPLYSTISPSSWEAALVGMQACLMKP
TLHVGLQFTQQATDNVVGELYRKELGLQSFIYVPISNGEQPVASLILASKAHYAFTYKDL
YTLQDISQHMSLALENVLAFERIRMLSERLEQEKTYLVEEIKTSHNFGEIIGHSPTMQVV
FTNISQVAPTDATVLILGETGTGKELVARAVHNLSSRKKRDIIKINCAALPAQLIESELF
GHERGSFTGATEKRIGKFELASGGTLFLDEIGELPLELQAKILRAIQEKEIERIGGRGPI
RIDARIIAATNRNLQQEVAEGRFRSDLYYRLNVFPIVVPPLRNRTDDIQPLALHFLRRIS
KKLGKPLTGIANDTLHQLLTYSWPGNIRELEHVLERAAILARSAILELAEPLQSALQTDL
SMGTSPRVEHVQPIDETMREAILAALTKAGGRIRGRGGAAELLNLKPTTLEARMKKLRIL
LRR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgttgccagccaacgaacgtacaccactcccctcactgctcatcgtagaggatgaattt
ttgatcgccaatgatttacggcgtattctaacgaaaggtggctatcagatcgatggaatt
gccggatctgtagaagaagcgaaaggacagattgccagtaaacgtcctgatattgtactg
ctggacattttccttgatggtcatgaaacaggtatagacctggcccatcggttaaataag
caggctattccgtttgtttttctgtcagctaatctgacggatggcttgctcgaggaagcc
aaagtaacacagccgttcggctttctgacaaaaccgtttcgggaaaaagacgtcttgtcg
acgctggaaatagcacgctaccgttacgcacatagcgaagaatccaaattacgtcaacaa
caaagtattcagatcgctgtcaacaacgccagcatcaacatgcaggatcgcgagcagttc
tgcttagccatcgcagaccagatcaaccgctttgttcctttttcgtttttcaccctacag
attggcctgcccgaagaatcgtcgttttactggctgatgctgaaaaaaaacgctgataac
acgttcagtaaaatcagccttataaccctacttcaagatgaagccgacgagtcgtttctt
aaaaagctcgatcaggaagcgccagaccagctgagtgaaaaaaccggcgtatttagtgga
gaaacgtttaaccaactttgtcaatcgtacgtaaccgcgcgcgcctaccgggataaattc
aacgttcggtctttggctttgtttccaatttccttgaagcgcaatgccgtaacaaccatc
acgttgtccagtacgctgaccgatggattttcggccaaagattaccaaacagttgatctg
atctgcccgcaaattgcgttgacgctggataatttgctggcttaccaggaactcgatacg
cgcaggcagattaaggcaattgaactagctgttgccaacgcctttcggagcgaagccagt
atgagcgctatccttgtactagtcgctcaagcaattaatgagctgctgcccgttgattta
cttgctctttaccggatcaatggcctgcaaacttcgggggccgatatactcagcacggta
cagaaaatcaaaggacgatttgaaccattagactctcagtcgttgcctttgtactcaacc
atcagcccttccagttgggaagcggctctggtcggaatgcaagcctgtctgatgaagcct
acacttcatgtgggtcttcaatttacccagcaggcaacggacaatgtggtcggtgaacta
taccgaaaagaactgggtctgcaatcattcatatacgtgcccatttccaatggtgaacaa
ccggtggcttcactgattctagctagcaaagctcattatgcttttacctacaaagacctc
tacacattgcaggatattagtcagcacatgtcactggccctggaaaacgtgcttgctttt
gagcgcatcagaatgctaagcgagcggctggaacaggagaaaacttatctggtcgaggag
ataaaaacgagtcataactttggtgaaattattggccatagtcctactatgcaggtagta
tttaccaacatcagtcaggtggcgccaaccgatgctactgtgctgattctgggcgagaca
ggtacgggtaaagagctggtagccagagctgtgcacaatctatcatcgcgtaagaaacgg
gacatcatcaagatcaactgtgccgccttgcccgcgcagctaatcgaatcagaacttttc
ggacacgaacgaggcagttttacgggggcgaccgaaaagcggattggaaagtttgaactg
gccagcggaggaaccttgtttctggacgaaattggcgaactcccccttgaattacaggcg
aagatcctgcgggccattcaggagaaggaaattgaacgaatcggcgggagaggtcctatt
cggatcgacgcgcgcatcattgcggctacaaaccggaacctccagcaagaggtagctgag
ggtcggtttcgctcggatctatattaccggctgaacgtgtttccgattgtggtgccgcct
ttgcgaaaccgtacggatgatattcaaccgctggccctgcacttcctgcgacgcatcagt
aaaaagctgggtaagccattgaccggtatcgccaacgatacgctacatcagctacttacc
tactcctggccgggaaatattcgcgagttggagcacgttttggagcgagccgctatccta
gcacggtctgccatactagaactagccgaaccgctacagtcagcgctccagactgacttg
tcgatgggaacgagcccacgggtcgagcacgtccagcctattgacgaaaccatgcgggag
gcaattctggcggctttaacaaaggcggggggccgtattcggggacgcggtggagccgct
gaactgctcaaccttaaaccgacgaccctcgaagcccggatgaaaaaactccgcatactc
ttaaggcggtaa
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