Spirosoma oryzicola: LQ777_27270
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Entry
LQ777_27270 CDS
T08981
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
soq
Spirosoma oryzicola
Pathway
soq00520
Amino sugar and nucleotide sugar metabolism
soq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
LQ777_27270
Enzymes [BR:
soq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
LQ777_27270
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GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
UHG94425
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Position
unnamed4:46159..47841
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AA seq
560 aa
AA seq
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MKKYFLASALIASLIGSAPDTSAQTTLVNPILTGFYPDPSIVKVGMDYYLVNSTFSYFPG
LPIMHSKDLKNWKQIGNVIDRPEQMDFMGERLTRGLFAPGISYNKGTFYVTCTDIDHDGN
FVVTAKNPAGPWSNPVKIPQVKGIDPSIYFDESTGKAYIIYNSDAPDRKPLYSGHRTIRM
YEFDPVKLTVIGEEKQLVNGGVDLSKKPVWIEGPHIMKRNGWYYLYAAEGGTSVNHSEVI
LRSKDVWGPYVPFEGNPILTQRGLPADRKDPITSAGHAQFVNGPDGKMYCIFLAVRPYEG
DYYNTGRETFIAPVTWQNDWPMIEHGEKAIAYSYPVDYKEVKQKGALPQSGNFAYTLTFD
KGLDPALLFMRTHDKNAYSLSKKDGLTLKLKPETVMEMGNPAFIGKRQQHLNSIAETELT
FNPKSDKEKAGLIVLQDEGHFYFLCKSQSQGKDVLQLYKSVPREKTMELLTEAPLDAKAG
KVGFRITSQGDTYSFYTSTDAKNWTLLKDKVDGKFLSTKVSGGFIGCVYGMYATSSGEPT
TNAASFQHLKYQGNDSMLKQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatacttcctcgctagtgccttaattgcatcgctaattggatcagcacctgat
acgtccgcccagactacgctggtcaaccccatcctgacaggtttttatccggatcccagc
atcgtgaaggttggaatggattactacctggttaactcgacgttttcgtatttccccggt
ctgccaatcatgcacagtaaagacctgaaaaactggaagcagatcggcaatgtgatcgac
cgtcccgaacagatggactttatgggtgagcgtctgacccgaggtctgtttgcgccgggt
atcagctacaataagggcacgttctacgtcacctgtaccgacatcgaccacgatggtaac
tttgttgttacggctaaaaatcccgccgggccgtggagtaaccccgtgaagattccgcag
gtgaaaggcatcgacccgtccatctattttgatgaaagcacgggcaaagcctacatcatt
tacaacagcgacgcaccggaccggaaacccctgtattcaggccatcgcacgatccggatg
tatgagttcgacccagttaaactaacggtgatcggcgaagaaaaacagctggttaatggg
ggcgtggatctgtcgaagaagcccgtctggattgaaggaccacacatcatgaaacgcaac
ggctggtactacctctacgcggccgaaggcggtacgtcggtcaaccactctgaagtgatt
ttacggagtaaagacgtttgggggccttacgtgccgttcgaagggaatccaatcctgacg
cagcggggattaccggcggatcgcaaagatcccattacgtcggcgggccacgcgcagttt
gtgaacgggccggatggcaagatgtactgtattttcctggccgtcagaccctacgagggc
gattattacaacacgggtcgcgagacgttcattgcgcccgtaacctggcaaaacgactgg
ccgatgatcgagcatggcgaaaaagccattgcctacagctatccggttgattacaaggaa
gtcaagcaaaagggcgccctgccgcagtcgggcaatttcgcctacacgctgacttttgac
aaaggactggacccggcgcttctgttcatgcgcacccacgacaaaaacgcgtattctctc
tcgaaaaaagatgggttgacgctgaaactgaaacccgaaacagtgatggagatgggcaac
ccggcttttatcgggaagcgccagcagcacctcaacagcatcgccgaaaccgagctgacg
ttcaacccgaaatcagacaaggaaaaggccggactcatcgttttacaggacgaaggccac
ttctattttctgtgtaaatcgcagtcgcaggggaaagatgtgctgcaactatacaagagc
gttccccgcgaaaaaacgatggaactgttgacggaggcaccactggatgcaaaggccggt
aaagtcggttttcgtattacgtcacaaggcgatacatatagcttttacacctcaaccgat
gccaaaaactggacgctgctaaaagacaaagtggatggcaagtttctgagcacgaaagtg
tctggtggtttcattggctgtgtgtacgggatgtatgctacgtcgtcgggtgaaccaacg
accaacgcggcttccttccaacacctgaagtatcagggcaacgattcgatgctgaagcaa
tag
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