Spirosoma oryzicola: LQ777_29405
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Entry
LQ777_29405 CDS
T08981
Name
(GenBank) PAS domain S-box protein
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
soq
Spirosoma oryzicola
Pathway
soq02020
Two-component system
soq02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LQ777_29405
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
LQ777_29405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soq02022
]
LQ777_29405
02035 Bacterial motility proteins [BR:
soq02035
]
LQ777_29405
Enzymes [BR:
soq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
LQ777_29405
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
LQ777_29405
Two-component system [BR:
soq02022
]
CheA family
CheA-CheYBV (chemotaxis)
LQ777_29405
Bacterial motility proteins [BR:
soq02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
LQ777_29405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
PAS_4
PAS
PAS_3
PAS_9
PAS_8
HATPase_c
CheR_N
HisKA
PAS_7
Methyltransf_12
EXOC6_Sec15_N
Motif
Other DBs
NCBI-ProteinID:
UHG94838
LinkDB
All DBs
Position
unnamed7:complement(join(133623..136743,1..1805))
Genome browser
AA seq
1641 aa
AA seq
DB search
MAKKKSTSDSPQSNLSSNVPIVAIGASAGGQQAVVELLQNLLPTTGLAYVYVQHLDPTQE
SRLVDILGRATEMPVHEAQHLMRVEPNQVYIIPPDQDLEVLDGVLTLKPRESRSSIHMPI
DQFFLSLAERQKEGSIAVVLSGAASDGTLGMRAIKAAGGITFAQDETARFQSMPRSAILE
GVVDRVLPPAEIAKELERLSQQTSLFQQTTLTELEETDNLEAMLDEPTASSSEDLRMIIQ
LLRRSTGVDFSHYKITTIRRRIIRRTLLYKLDSLRAYADYLRQHPDEALLLYDDLLINVT
TFFRDADTMDYIQKVLLPQLVREKPAAEPIRIWVPACSTGQEAYSLAILLLEVLGERAIS
RTIQLFATDLSESAVAKARLGSYTRGEVMDISPRRLQRFFTKVDDHYRINKSVRDLCVFA
PHNLLKDPPFSRLDLVSCRNLLIYLDATLQRKAIVTFHYALNPNGYLVLGKSETVGSSAQ
MFSQLEKNYKIFARKNDVDSRATFTLTPRQLDGDYINSRPTTIPKTTNQPSGNLLDRHLP
SGQERWSGSGADLDKLVDNLLLNQYVPASVVVSQDMEILQFRGSTGMFLEPSPGKASLNL
IKMARPALVFELRNAVHKAQKSGESVRKSGLEFKVRNKTHYASIEAVPLDTATEERLFLI
IFEEVDPPVAPVTQSTSARNRRIKELESELANLREDMRSIIEEQEASNEELQSANEEIIS
SNEELQSINEELETSKEEIESTNEELLTINQELQVRNDQLSEAHQFSEDIFNTIREATLV
LDTDLRIKSANPAFYRLFQLNASETEGRLIYELGNRQWDIPDLRLMLTDVVTSGAQFQGY
ELTYQSLITGEKRLSLNARRVVRQQDSILLAIEDITEHRRAQQLLAEREAWFHQIADNAP
TLIWVTDANGQYTFLNKVWLEFTGRSQEEVMKRGWAESLHPDDQSDYLKIYNSNLNTRQS
FQAEYRLHRHDGAYRWMQENAQPMFGTDGVFNGFIGSSADVHLQKELNQELDLRVQERTQ
ELEQSNATIQRMLDGSIAAIVLLDPLYNKTGSIIDFVFRAANKPSEEIYQKTEAQLLGKR
LLEELPDTHRAFLDTYLSVMETGESVRMEGLYSQAPLEAWLDMTVTKNGGGLILSFIDIT
ERRKAESEIRKNLTLLQQTENIAKTGSWEYNRSTGTMIWSEGMYRLFGLELGTLVKPETY
LTFAHEDDRATAQRLVENLEQGTQSFEETIRIRSTDGVKTLKVIGEIMQDRNPAPLRVLG
IDWDITDLEQAAEQLREQAINLQAVLNSSPAAISFLKPVYERSGESGTEHIADFRLVVCN
QEFAQIAGYAVADLSNQVISQLADKLWKEHTIDNIRHVLETGEPFFEDRYDADKDQWMLI
ALTKFDSGVVLTGQDFTRLKKAEQQQEQWLNELEKSNENMQVLVQLRQQLRERGEFLRST
SHDLRGNFGIIQGAATLLDMANTDEERSQILSMLQRNLKQGTQMLTELLDMARLEAGQEK
RQVSSFNVADLLNGLIDSVQPLASERQLWLHNEGAENLTVQGDAVKVHRIAQNLLLNALN
YTQTGGVIVQWGDAPTSDRWLLTITDTGPGLPERIRAKSGEGIGLVIVQQLCQLLDCQIE
INSQPETGTQFRLLFPRTYPD
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaagtccacctccgattctccgcagtccaacttgtcctcaaacgttccc
attgttgccattggtgcatcagcgggcggacagcaagcggtggttgaactgttgcagaac
ctgttgcccacaacaggactagcctacgtatatgttcagcaccttgatccaacgcaggaa
agtcggttggtagacattcttggccgggcaacggaaatgcccgtgcacgaagcacagcac
ttgatgcgggttgaacccaatcaggtatacatcattccacctgaccaggatctggaggta
ttggatggggttctcaccctgaagccgcgcgagtcccgttcgtcgatccacatgcctatc
gaccagttttttttatcgctggccgaacggcagaaagaaggttccattgctgttgtgctg
tcgggtgcggcttccgacgggacgctgggcatgcgcgccatcaaagctgcgggcggaata
acatttgcccaggacgaaacggcccggtttcagagtatgccccggtcggccattctggaa
ggggtagtagaccgggtattgccacccgccgaaatcgctaaagaactcgaacggcttagc
cagcaaacatcgttgtttcagcagacaacgctaacggaactggaggaaacggacaatctg
gaagcgatgctggatgaacctacggcctcttccagtgaagatttgcggatgatcattcag
ctactgcgtcggtcgacgggggttgatttcagtcactacaaaataacgactattcgccgg
cgtattatccgccgaacgctgctctataaactggactctctgcgcgcctatgccgactat
ctgcgccagcatcccgatgaagccttgttgctttatgatgatctgctgatcaatgtgacg
actttttttcgggatgccgatacgatggattacatccagaaagttctgcttccgcagctc
gtccgcgagaaaccagccgctgagcctatccgcatctgggtacccgcctgctcaacgggg
caggaagcctattcgctggctattctgttgctggaagtactgggggagcgggctataagc
cggactattcagttattcgcgaccgacttgagcgagtcggctgtggcaaaagcccgactg
ggcagctacacgcgcggggaagtgatggacatatcaccccggcgactgcaacgcttcttt
accaaagtagatgaccactaccgcatcaacaaatcggtgcgggacctgtgcgtatttgct
ccccacaatttgctcaaggatccgcccttttcgcgactcgatctggtcagttgccgcaat
ctgcttatttatctggatgcaaccctccagcgcaaagccatcgtcacgtttcactacgcc
ctgaatccgaacggctatctggtgcttggaaagtctgaaacggtaggttcttcggcgcag
atgttctcgcagctggaaaaaaattataagatttttgcccgtaaaaacgacgtcgacagc
cgggccacatttacgcttacaccccgtcaactggacggtgactacataaacagccgtccg
acgacgattcccaaaacgactaatcagccgagtggtaacttgttggatcgtcatttgccg
tcaggacaggagcggtggtcgggttcgggtgctgatctggataaactggttgacaatttg
ctgctgaatcagtacgtcccggccagtgtggtcgtgagtcaggacatggaaatccttcag
tttcgggggtcaaccggtatgtttctggaaccatcgccggggaaagccagcctgaacctg
atcaagatggcccggcccgcgctggtatttgaactgcgaaatgcggttcataaagcccag
aagtcgggcgagtctgttcgcaaaagtggtctggaatttaaggttagaaacaaaacgcat
tacgcgtctattgaagccgtgccgctcgatacggctaccgaagagcggttgtttctgatt
atcttcgaggaagtcgatccaccggtagcaccggttacccaatcgaccagtgcccgcaac
cgccggatcaaagaactggaatccgaactggccaacctgcgggaagatatgcgctccatc
atcgaagaacaggaagccagcaatgaagaacttcaatcggcaaacgaggaaatcatcagc
agcaacgaagagttgcagagcatcaatgaagaactcgagaccagtaaggaagaaattgag
tcaaccaacgaagaactgctgacgatcaaccaggagttgcaggtacgcaatgatcagttg
tcggaggctcaccagttctcggaggatattttcaataccattcgcgaagctacgctggta
ctcgataccgatctccggataaaaagtgccaaccctgctttctaccggctgttccagcta
aacgcgagcgaaacagaaggccgacttatttacgaattaggcaatcggcagtgggacatt
cccgacttgcggcttatgcttaccgatgtggtcacctccggagcgcagtttcaagggtac
gaacttacgtatcagtcgctcataacgggcgaaaagcggctttcactcaacgcccggcgc
gtcgttcgtcagcaggattccattctactggctatcgaagacattaccgaacaccggcgg
gcgcagcaactgcttgccgaacgggaggcctggttccaccagatcgccgacaatgcccca
acgcttatctgggtcaccgacgccaatggtcagtacacattcttgaataaagtctggctg
gaatttacggggcgttcgcaggaagaagtgatgaagcgcggttgggccgagagtctgcat
ccagacgaccagtccgactacctgaagatctacaacagcaacctgaatacccggcaatcc
tttcaggccgagtaccgcctgcaccgacacgatggcgcataccgatggatgcaggagaat
gcccagccgatgtttggaaccgatggcgtcttcaacggatttatcggtagctcggccgac
gtccatttgcaaaaggaactgaatcaggaactggacctgcgggtacaggaacgtacgcaa
gaactggaacaatccaacgctaccattcagcggatgctcgatggatcaattgccgccatc
gttctgcttgatccgttgtacaataagacaggaagcatcatcgattttgtgttccgggct
gccaacaaaccgtccgaagagatttatcagaagaccgaagctcaacttctgggtaaacgg
ttgctggaagaattgccggacacgcaccgggcttttctggacacctatctaagcgtgatg
gaaaccggtgaatccgttcgtatggaagggctgtatagtcaagcgcctttggaagcctgg
ctggatatgaccgtgacgaaaaacggcggagggcttattctgagcttcattgacatcacc
gaacgccggaaagcagagtctgaaatccggaaaaacctgaccctgctgcaacaaacggaa
aacatcgctaaaaccggaagctgggaatacaaccggtcaacgggcacgatgatctggtcg
gaggggatgtaccggttgtttggtctcgaactaggtacgctcgtcaagcctgaaacctac
ctaacgtttgcgcacgaggatgatcgtgctacggcccaacgtctggtcgaaaacttagaa
caaggtacgcagtctttcgaggaaacaatacggattcgaagcacagatggcgtcaaaacc
ctcaaggtgatcggcgaaattatgcaggaccgcaatcccgctcccctgcgtgtgttggga
atcgattgggacattaccgatttggagcaggcggcagaacagttacgggaacaggccata
aacctgcaagctgtgctgaacagctcaccggctgctattagttttctaaaacccgtatac
gagcgttcgggtgaatccggcactgagcatattgctgattttcgcctggtagtttgcaat
caggagttcgctcagatagccggctatgccgttgcggatttatcgaaccaggtgatttct
cagttggcggataaactctggaaagagcatacaatcgataacatccggcatgtgctggaa
acgggagagccttttttcgaggatcgctacgacgcagataaagaccaatggatgctgatt
gctttgacaaagtttgacagtggtgtggtgctgaccggtcaggactttacccgattgaaa
aaagcggaacagcaacaggaacagtggcttaacgaactggaaaagtcgaacgagaacatg
caggtactggttcagcttcgccagcagttacgggagcggggtgagtttttgcggagtaca
tcgcacgatctacggggtaactttggcatcatccagggagccgctacactgctggatatg
gctaacaccgacgaagagcgcagccaaatactgagtatgcttcagcggaatttaaagcag
ggaacccaaatgcttacggaactgctggatatggcccggctggaagctggtcaggaaaaa
cggcaagtgtcatcctttaacgtcgctgatttgttgaacgggttgattgatagcgttcag
ccattagccagcgaacggcagctgtggctgcacaatgaaggcgctgaaaacctgaccgtg
cagggagatgccgtaaaagtgcaccggatagcccagaacctattgctcaacgcgttgaat
tacacccagactggtggcgtaatcgttcagtggggggacgcacctacttcggatcgatgg
ttgcttaccattaccgataccggaccgggcttacccgaacgaatccgcgctaaatccggg
gagggcattggccttgtcatcgtgcagcagttatgtcagttactagactgtcagatagaa
attaatagccagccggaaacgggtacgcagtttcggttactgtttccccgaacgtatccc
gactga
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integrated database retrieval system
