Streptococcus oralis: SOR_0027
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Entry
SOR_0027 CDS
T01476
Symbol
radA
Name
(GenBank) DNA repair protein, predicted ATP-dependent serine protease
KO
K04485
DNA repair protein RadA/Sms
Organism
sor
Streptococcus oralis
Brite
KEGG Orthology (KO) [BR:
sor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sor03400
]
SOR_0027 (radA)
DNA repair and recombination proteins [BR:
sor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SOR_0027 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Lon_C
AAA_22
AAA_16
GvpD_P-loop
AAA
ABC_tran
AAA_14
SLFN-g3_helicase
AAA_24
nSTAND3
NTPase_1
TniB
RecA
MCM
NACHT
AAA_5
ATPase_2
AAA_19
AAA_18
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
CBY99745
UniProt:
F2QG85
LinkDB
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Position
23697..24920
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AA seq
407 aa
AA seq
DB search
MSLTGEKTKPMKLAEVTSINVNRTKTEMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLL
QVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRSEVERIQPDF
LIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRML
EHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLD
GATGSSIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRASLIMAVLEKRAGLLL
QNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDKPTNPQECFVGELGLTGEIRRVNRIE
QRINEAAKLGFTKIYVPKNSLTGITPPKEIEVIGVTTIQEVLKKVFA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgtccttgacaggtgaaaaaaccaagcctatgaaactggctgaggtgacttccatcaat
gtcaatcgaaccaagacggagatggaggaattcaaccgtgtacttggaggcggagtggta
ccagggagtctcgtccttatcggtggggatccaggaatcgggaaatcaacccttctccta
caagtttcaacccagctgtctcaagtagggactgttctctatgtcagtggggaggagtct
gctcagcagattaaactccgtgcagagcgcttgggtgatattgatagtgagttttatctc
tatgcagagaccaatatgcagagtgttcgatctgaggtggagcgcatccaaccagatttt
ctcatcatcgactctatccagacgattatgtctcctgagatttcaggggtgcaggggtct
gtttctcaggtgcgtgaggtgaccgctgagcttatgcagctggctaagaccaataacatt
gccatctttatcgtagggcatgtgaccaaggaagggaccttggctggtccgcgtatgttg
gagcatatggtggatacggtgctttactttgaaggggaacgccaccataccttccgaatc
ttacgagcggtcaaaaaccgttttgggtccactaatgagattggcatctttgagatgcag
tcgggcggattggttgaggtgcttaatccgagtcaagttttcctagaagagcgtttggac
ggagcgactggttcatcaattgtggtgactatggaaggaacccgtccgattttggcggag
gttcaggctttggtaacaccaaccatgtttggaaatgctaaacgcacgacgacaggtctt
gatttcaatcgtgcgagtctgattatggctgttttggaaaaacgagcagggcttctcttg
caaaatcaggatgcctatctcaaatctgctggtggcgtgaaattggatgagcctgccatt
gacttagccgttgcagtggctattgcctctagttacaaggacaagcctaccaatcctcag
gaatgttttgtgggtgaactgggcttgaccggagaaattcggcgcgtgaatcgtatcgaa
caacgtatcaatgaagcggcaaaactgggctttaccaagatttatgtacccaagaattcc
ttgacaggaatcactccacccaaggaaattgaagtcattggtgtgacaacgattcaggaa
gttttgaaaaaggtctttgcataa
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