Streptococcus oralis: SOR_1225
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Entry
SOR_1225 CDS
T01476
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sor
Streptococcus oralis
Pathway
sor03030
DNA replication
sor03430
Mismatch repair
sor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOR_1225 (holB)
03430 Mismatch repair
SOR_1225 (holB)
03440 Homologous recombination
SOR_1225 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sor03032
]
SOR_1225 (holB)
03400 DNA repair and recombination proteins [BR:
sor03400
]
SOR_1225 (holB)
Enzymes [BR:
sor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOR_1225 (holB)
DNA replication proteins [BR:
sor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOR_1225 (holB)
DNA repair and recombination proteins [BR:
sor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOR_1225 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
CBZ00883
UniProt:
F2QE14
LinkDB
All DBs
Position
complement(1199989..1200879)
Genome browser
AA seq
296 aa
AA seq
DB search
MKQEQLKALQPEQFDRFICILEQDQLNHAYLFSGFFGSLEMAQFLAKSLFCTDKVGVLPC
ENCRNCKLIEQEEFPDVTLIKPVNQVIKTERIRELVGQFSQTGIESQQQVFIIEQAEKMH
PNAANSLLKVIEEPQSEVYIFFLTSDEEKILPTIRSRTQIFNFKKQEEKLIHQLEQAGLV
KKKATLLAQFCQSRAEAEKLVNQASFWTLVDESERLLTWLVAKKTESYLQVAKLASLADD
KEKQDQVLRILEVLCGQDLLQARIRQILQDLLEARKMWQANVSFQNAMEYLVLKEI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagaacaactaaaggctttgcaaccagagcagtttgaccgctttatctgtatc
ctagaacaagaccagctcaatcacgcctatctcttttcaggtttctttggaagtttggaa
atggcgcaatttttggctaaaagtcttttctgtacggataaagtaggcgttttaccatgt
gagaactgccgaaactgcaagctgattgaacaggaagaatttcccgatgttaccttgatt
aagccagtcaatcaggtcattaagacagaacgcattcgggaattggtgggccagttttcc
caaacagggattgaaagccagcaacaggtctttattatcgagcaggcggaaaaaatgcat
cccaacgcagccaattctctgcttaaggtcatcgaagaacctcagagtgaagtttatatt
ttcttcttaaccagtgatgaggaaaaaatcttgccgacaatccgtagtcggacccagatt
ttcaactttaaaaagcaagaagaaaagctcatccatcaattagaacaagcaggtctggtc
aagaaaaaagcgactctcttagcccagttttgtcaatcacgagctgaagctgaaaagttg
gtcaatcaagcaagtttttggaccttggtggatgaaagtgagcgcctgctgacttggtta
gtagccaagaaaacagagagttatttgcaggtagccaaattagctagtttggcagatgac
aaggaaaaacaagatcaggtcttgcgaatcctcgaagtgctctgtggacaggatctcttg
caagcaagaattcgacagattctgcaagatttgctagaagctagaaaaatgtggcaagcc
aatgttagctttcaaaatgccatggaatatctggtcttgaaagaaatataa
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