Streptococcus oralis: SOR_1444
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Entry
SOR_1444 CDS
T01476
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sor
Streptococcus oralis
Pathway
sor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOR_1444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sor03019
]
SOR_1444
03009 Ribosome biogenesis [BR:
sor03009
]
SOR_1444
Enzymes [BR:
sor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SOR_1444
Messenger RNA biogenesis [BR:
sor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SOR_1444
Ribosome biogenesis [BR:
sor03009
]
Prokaryotic type
rRNA helicases
SOR_1444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBZ01096
UniProt:
F2QEM7
LinkDB
All DBs
Position
complement(1394260..1395837)
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AA seq
525 aa
AA seq
DB search
MKFNEFNLSAELLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
EKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLF
SATMPDAIKRIGVQFMKDPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVEQPE
LAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVSPNEMGYLQIIENLTKK
RMKGLKPATAEEAFQAKKQVALKKIERDFADEAIRGNFEKFAKDARKLAAEFSPEELAMY
ILSLTVQDPDSLPEVEIAREKPLPFKPSGNGFGGKGKGGRGDRRGDDRRDRDRRGNGHRD
DFKKGSRGNDRFDKDRRYRNKDNRKPRNTSSEKKTGFVIRNKGDK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttaatgaatttaacttgtctgctgaattgctagcagagattgaaaaagctgga
tttgtagaagccagtcccatccaagaacagaccattcccttggctctcgaaggaaaagac
gttatcggtcaagctcagactggtacaggaaaaactgcagcctttggcttgccaaccctt
gaaaaaatccgtacagaagaagcgaccatccaagccttggtcatcgctccaactcgtgaa
ctcgcagttcaaagccaagaagaactcttccgatttggccgtagcaagggagtgaaagtt
cgctcagtttacggtggttccagcattgaaaaacaaatcaaggcccttaaatctggtgcc
catatcgtggtaggaacaccaggccgtctcttggacttgattaaacgcaaggccttgaaa
ttacaagatattgaaaccctcatccttgacgaagcggatgaaatgctcaatatgggcttc
cttgaagacattgaagccatcatttcccgtgtccctgaaaatcgtcaaaccttgctcttt
tcagcaaccatgccagatgctatcaaacgtattggtgttcagtttatgaaagaccctgag
catgtcaaaattgctgccaaggaattgacaacagagctggtggaccagtactatatccgt
gtcaaggaacaagagaaatttgataccatgacacgtctcatggatgtggaacaaccagaa
cttgctatcgtatttggtcgtaccaaacgccgtgtagatgaattgactcgtggtcttaaa
atccgtggcttccgtgcagaagggattcatggtgatttggaccaaaacaaacgtcttcgt
gtccttcgtgattttaaaaatgggaatcttgatgttctagttgcgacagacgtagcagca
cgtggtttggatatctcaggtgtgacccacgtctacaactacgatattccacaagatcct
gaaagttatgttcaccgtatcggtcgtacaggtcgtgctggtaagtcaggtcaatctatt
acctttgtttctccaaatgaaatgggctaccttcaaattattgaaaacttgactaagaag
cgcatgaaaggcttgaaaccagcgacagcagaagaagccttccaagctaagaaacaagta
gcgctcaagaaaatcgaacgagacttcgcagacgaagccattcgtgggaacttcgagaaa
tttgctaaagatgctcgtaagttagctgcagaatttagtccagaagaattggctatgtat
atcttgagtctgacagtccaagatccagacagccttcctgaagtggagattgcgcgtgaa
aaaccactgccatttaaaccatcaggtaatggctttggtggcaaaggcaagggaggtcga
ggagaccgtcgtggagatgaccgtcgagatcgtgatcgccgtggcaatggtcaccgtgat
gatttcaagaaaggcagtcgtgggaacgatcgttttgataaagacagacgttaccgtaat
aaagacaatagaaaacctcgcaacacttcaagcgaaaagaagactggctttgttattcgt
aacaaaggagacaaatag
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