Streptococcus oralis: SOR_1845
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Entry
SOR_1845 CDS
T01476
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sor
Streptococcus oralis
Pathway
sor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOR_1845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sor03019
]
SOR_1845
Messenger RNA biogenesis [BR:
sor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SOR_1845
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Lactamase_B_6
DUF4453
Motif
Other DBs
NCBI-ProteinID:
CBZ01492
UniProt:
F2QFS3
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All DBs
Position
1802420..1804099
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AA seq
559 aa
AA seq
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MAYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL
YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRLQ
QATDAAVKTGRKIAVFGRSMEKAIVNGIELGYIKAPKGTFIEPNEIKDYPAGEVLILCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHGK
INNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMSNG
DVLALTANSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKSKM
ILSGPDILSRGFVYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRPFLY
ENTEREPIIIPMILTPDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcctacactcttaaacctgaagaagtcggcgtttttgccatcggtggtctgggagaa
atcgggaaaaacacatacggaattgaataccaagacgagattatcatcgttgatgctggg
attaaatttccagaagatgacttgctaggtatcgactatgtcattcctgattactcttac
atcgtggacaatatcgaccgcgtcaaggctgtcttgatcacacacggacacgaggaccac
attggtgggattcctttcctgctcaagcaagcaaatgtccctatctacgctggaccactt
gccttagctttgatccgtggaaaactcgaagaacacggtctcttgcgcaacgccaaactt
tacgaaatcaaccacaacactgagttgacctttaaaaatctcaaggcaactttctttaga
accactcactctattccagagcctttaggaattgtcattcatacccctcaaggaaaaatc
gtctgtacgggtgactttaagtttgactttactccagttggggaaccagcggacttgcac
cgtatggcagcccttggtgaagaaggcgtactctgcctcctctctgactcgacaaatgca
gaagtcccaacctttaccaactctgaaaaagtcgttggtcagtccatcatgaagattatc
caaggcatcgaaggacgtatcatctttgcatcctttgcctcaaatatcttccgtctccag
caagcaacagatgccgctgttaagactggacgcaagattgcggtctttggtcgttctatg
gaaaaggccattgtcaacgggatcgagcttggctacatcaaagctcctaagggaaccttt
atcgagccaaatgaaatcaaagactaccctgcaggcgaggttcttatcctctgtacaggt
agtcaaggtgagccgatggcagccctctctcgtatcgctaacggaactcaccgtcaggtg
caactccaacccggcgataccgttatcttctcttctagcccaatccctggaaatactact
agcgtcaacaagttgattaacattatctcagaagctggtgtcgaagtcatccacggaaag
attaacaatatccacacctctggacacggtggtcagcaagagcaaaaactcatgctccgc
ttgatcaagccaaaatacttcatgcctgtccatggtgaataccgcatgcaaaaagtccac
gctggactagcggtggatacgggtgtcgagaaggacaatatctttatcatgagcaatggt
gatgtgcttgcccttactgctaactcagcccgtatcgcagggcacttcaatgcccaagac
atctatgtcgatggaaatcgtatcggtgaaatcggcgctgctgtcctcaaagaccgtcgt
gatctatctgaagatggtgtcgttctagcagtcgcaactgttgacttcaagtctaaaatg
atcttgtctggtcctgacatcctcagccgaggctttgtctacatgagagaatctggtgac
ttgattcgccaaagccagcgcatcctcttcaatgcaattcgtatcgcgctgaagaataaa
gatgctagcgtgcaatctgtcaatggcgccattgtcaacgccattcgtcctttcctctat
gaaaacacagaacgtgaaccgatcattatcccgatgatcctcacaccagatgaagaataa
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