Streptococcus oralis: SOR_1940
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Entry
SOR_1940 CDS
T01476
Symbol
polI
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sor
Streptococcus oralis
Pathway
sor03030
DNA replication
sor03410
Base excision repair
sor03420
Nucleotide excision repair
sor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOR_1940 (polI)
03410 Base excision repair
SOR_1940 (polI)
03420 Nucleotide excision repair
SOR_1940 (polI)
03440 Homologous recombination
SOR_1940 (polI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sor03032
]
SOR_1940 (polI)
03400 DNA repair and recombination proteins [BR:
sor03400
]
SOR_1940 (polI)
Enzymes [BR:
sor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOR_1940 (polI)
DNA replication proteins [BR:
sor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SOR_1940 (polI)
DNA repair and recombination proteins [BR:
sor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SOR_1940 (polI)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOR_1940 (polI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CBZ01587
UniProt:
F2QG18
LinkDB
All DBs
Position
complement(1905972..1908605)
Genome browser
AA seq
877 aa
AA seq
DB search
MDKKKLLLIDGSSVAFRAFFALYQQLDRFKNANGLHTNAIYGFQLMLNHVLERVEPSHVL
VAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHLGIRHYELPQYEADDIIG
TLGRLAEKDSFDVTIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEKMGLTPAQ
FIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMKASKMKENLINDKE
QAFLSKTLATIETQAPIEIGLDDLVYNGPDVENLGKFYDEMGFKQLKQALNVSSKDAPES
LDFTIVDQVSQDMLSADSIFHFELFGENYHTDDLVGFAWSCGDKLYTTDKLELLQEPILK
EFLEKTPLKVYDFKKAKVLLNRLGLNLQAPAYDSRLAKYLLSTVENNEISTIANLYGQTY
LVDDETFYGKGVKKAIPEREKFLEHLARKVAVLVETEPVLLEKLSEHGQLDLLYDMEQPL
AFVLAKMEIAGIKVKKETLLEMQAENEVVIEQLTQEIYELAGEEFNINSPKQLGVLLFEK
LGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILDDG
KIHTRYVQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPEWEDSVLLSSDYSQIELR
VLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPEDVTPNDRRNAKAVNFGVVYGISDF
GLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLFKRRRELPDINSR
NFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVEGGYQTKMLLQVHDEIVLEVPKS
ELAAVKDLVKQTMEEAIQLSVPLIADENEGATWYEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaaaaattattattaattgatggatcttctgttgcttttcgagcttttttt
gcgctttatcagcagctggatcgttttaaaaatgctaatggtcttcataccaatgcaatc
tatggctttcaactcatgttaaatcatgtcttggagcgagtcgaacccagccatgttttg
gtagcttttgatgcaggcaagacgactttccgaacagagatgtatgcagactacaagggt
ggccgtgctaaaactccagatgagtttcgtgagcaatttcccttcattcgtgagttgtta
gaccatcttgggattcgacactacgagttgccccagtatgaggcagatgatatcatcggg
actctgggccgtttggctgagaaggattcttttgatgtgacaatcgttagcggagataag
gatttgatccagttgacggacgagcatacggtggtagagatttccaaaaaaggtgtggct
gagtttgaggcctttacgccggactatctcatggaaaagatgggcctcacgccagctcag
ttcattgatcttaaggccctcatgggggataagtctgataatatccctggtgtcacgaaa
gtcggtgaaaagacgggtatcaagctcttgctggaacatggttcgctcgagggtatttat
gaaaatatcgatgggatgaaggcttctaagatgaaggaaaatctcatcaatgacaaggaa
caagcctttttgtctaaaaccttggcgaccattgaaactcaggcaccaattgagattggc
cttgatgatttggtatataatggcccagatgtggaaaatctcgggaaattctacgatgag
atgggcttcaaacagctcaaacaagctctaaatgtttcgtcgaaggatgcgcctgagagc
ttggatttcactattgttgaccaagtcagtcaagacatgctgagtgccgactctatcttc
cactttgaactctttggtgaaaattaccatacagatgatttggttggttttgcctggtcc
tgtggggataaactttacactacagataaacttgagctcttgcaggagccgattctcaag
gaatttttagaaaaaacacctctgaaagtgtatgactttaagaaagcgaaggttctttta
aatcgcttgggtttgaacctccaggcacctgcttatgacagtcgcttggcaaaatactta
ctctcaacagtcgagaacaatgaaatctcaaccattgcgaatctctatggccagacttac
ttggtcgatgatgagactttctacggtaagggtgtcaagaaagctatccctgagagagag
aaattcttggagcacttggctcgcaaagttgctgtattggttgagactgagcctgtttta
cttgaaaaactcagtgaacatggacaattagaccttctctatgacatggagcaacctctg
gcttttgtccttgctaagatggaaattgctgggatcaaggtcaaaaaagaaaccctactt
gagatgcaggctgaaaatgaggtcgtcattgagcaactcactcaagagatttatgagcta
gctggtgaggagtttaatatcaactcccctaagcagttgggcgtgcttctctttgaaaaa
ctgggtcttcctctagaatacactaagaaaaccaaaacaggttactcgacagccgtggat
gtgctagagcgactagctcctattgctccgattgttaaaaaaattctagactaccgtcag
attgctaagattcaatctacctatgtgattggtttgcaggactggattttggatgatggc
aagatccacacgcgctacgtgcaggatttgactcagaccggacgtctgtctagtgtagat
ccaaacttgcaaaatatccctgttcgtttggaacaaggccgtctcattcgtaaggccttt
gtacctgaatgggaggatagtgttcttcttagctcggattattcgcagattgagttgcgc
gttttggctcatatttctaaggatgagcacttgattaaggccttccaagagggagcagac
atccatacctcgacagccatgcgggtctttggaattgaacgccctgaggatgtaactcca
aacgaccgtcgcaatgccaaggctgtcaactttggagtggtctacggaatttcagatttt
ggtttatcgaataatctgggcatcagccgtaaagaggctaaggcttacattgatacctac
tttgaacgcttcccagggatcaaaaactacatggatgaagtggtacgtgaggcgcgtgat
aagggttatgtagagactctcttcaaacgtcgtcgtgagttgccagatattaattcgcgc
aacttcaacattcgtggttttgcagagcggacggccatcaactctcctattcagggttcg
gcagcagatatccttaagattgctatgatccagctagacaaggctctagttgaaggtggt
tatcagaccaagatgctgttgcaagtgcacgatgaaatcgtccttgaggttccgaaatcg
gaactagcagccgttaaagatctagtgaaacaaaccatggaagaagctatccagctcagt
gttccccttatcgcagatgagaatgaaggagcaacctggtacgaggctaaataa
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