Sorangium sp. So ce836: NQZ70_00998
Help
Entry
NQZ70_00998 CDS
T11263
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sorg Sorangium sp. So ce836
Pathway
sorg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sorg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQZ70_00998 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sorg03019
]
NQZ70_00998 (deaD)
03009 Ribosome biogenesis [BR:
sorg03009
]
NQZ70_00998 (deaD)
Enzymes [BR:
sorg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQZ70_00998 (deaD)
Messenger RNA biogenesis [BR:
sorg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQZ70_00998 (deaD)
Ribosome biogenesis [BR:
sorg03009
]
Prokaryotic type
rRNA helicases
NQZ70_00998 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WCQ88323
LinkDB
All DBs
Position
complement(1325860..1327644)
Genome browser
AA seq
594 aa
AA seq
DB search
MEPITSSASFAALGIGPALLGVLAELGYEEPTPIQREAIPHLLGGRDLLGQAATGTGKTA
AFALPLLQRLEIGSAPPGRPVALVLVPTRELAMQVAEAMHRYGRRLGVQVLSVYGGQPFG
QQLRALRRGVHVVVATPGRALDHIGRGTLALDGIRTVVLDEADEMLDMGFAEALEEILAA
TPGERQTVLFSATLPARIAAIAGRHLRDPVRVKIAVEKAAPGELPRVRQTAYIVPRAHKP
AALTRVLDMEDPSSAILFCRTRNEVDELTEALRARGYEAQALHGGFSQEHRDRVMARFRA
GAADLLVATDVAARGLDIEHVSHVINYDVPCAAEVYVHRIGRTGRAGREGAAITLIEPRE
HYLLRNVERLTGQRIEAATLPTVADLRARRLELTRASLREALLQGGAERFRVVVEGLADE
FDVMDIAAAAVQLAHRATEGDREEDKAEIPSFRPPPPAPERARDDRARRAPPGARGRPGE
APGRPRRGEREEREADGSVVRVYIGAGRAAGIRPADLVGAIANEASLSSRDIGAIQIADG
FSVVEVPADAADSVIEALRATRLKGRKVQVRRDHHAPPARAGGPTRAPAPRARG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtggaaccgatcacctcgtccgccagcttcgccgcgctcggcatcgggcctgccctcctc
ggcgtgctcgccgagctcggctacgaagagcccaccccgatccagcgcgaggcgatcccg
cacctcctcggcgggcgcgacctgctcgggcaggccgccaccggcaccgggaagacggcc
gcgttcgcgctgccgctgctccagcggctggagatcggcagcgcgccgcccggccgcccc
gtggccctcgtgctcgtgccgacccgcgagctcgccatgcaggtggccgaggcgatgcac
cgctacggccgccggctgggcgtgcaggtgctgtcggtctacggcggccagccgttcggg
cagcagctgcgcgcgctccggcgcggggtccacgtcgtcgtggcgacgccgggccgcgcg
ctcgaccacatcggccgcggcacgctcgccctcgacggcatccgcaccgtcgtgctcgac
gaggcggacgagatgctcgacatgggcttcgccgaggcgctggaggagatcctcgcggcc
acgccgggcgagcggcagacggtgctcttctcggcgacgctgccggcgcggatcgccgcg
atcgccggccggcacctgcgcgacccggtgcgggtcaagatcgcggtcgagaaggcggcc
ccgggcgagctcccgcgcgtgcgccagacggcgtatatcgtgccgcgggcgcacaagccc
gcggccctgacgcgggtgctcgacatggaggacccgtcgtcggcgatcctcttctgccgc
acgcgcaacgaggtggacgagctgaccgaggcgctgcgcgcccgcggctacgaggcccag
gcgctccacggcggcttctcgcaggagcaccgggatcgcgtgatggcgcgcttccgcgcc
ggcgcggccgacctgctcgtcgcgaccgacgtggcggcgcgggggctcgacatcgagcac
gtctcgcacgtcatcaactacgacgtcccctgcgccgccgaggtgtacgtccaccgcatc
ggccgcacgggccgcgccggccgggagggggcggcgatcacgctgatcgagccgcgcgag
cactacctgctccgcaacgtcgagcggctcacgggccagcgcatcgaggccgccaccctc
ccgacggtggccgatctgcgcgcccggcgcctcgagctgacgcgggcgtcgctccgggag
gcgctcctccagggcggcgccgagcggttccgggtcgtggtcgaggggctcgccgacgag
ttcgacgtgatggacatcgccgcggcggcggtgcagctcgcgcaccgcgcgacggagggg
gatcgggaggaggacaaggcggagatcccgtcgttccggccgccgccgcccgcgccggag
cgcgcgcgcgacgaccgcgcgcggcgcgccccgccgggggcgcgcgggcggccgggagag
gcccctgggcggccgcggcgcggggagcgcgaggagcgggaggccgacggcagcgtcgtg
cgggtctacatcggcgcggggcgcgccgcgggcatccggccggcggatctggtcggcgcg
atcgcgaacgaggcgtcgctgagctcgcgcgacatcggggccatccagatcgcggacggc
ttctccgtggtcgaggtgccggccgacgcggcggacagcgtcatcgaggcgctgcgcgcc
acccggctcaaggggcgcaaggttcaggtccgccgcgaccaccacgcccctccggcccgg
gctggaggtccgacgcgagccccagcgccgcgagcgcgcggatga
DBGET
integrated database retrieval system
