Sorangium sp. So ce836: NQZ70_04454
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Entry
NQZ70_04454 CDS
T11263
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sorg Sorangium sp. So ce836
Pathway
sorg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sorg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQZ70_04454 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sorg03019
]
NQZ70_04454 (rhlE)
Enzymes [BR:
sorg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQZ70_04454 (rhlE)
Messenger RNA biogenesis [BR:
sorg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQZ70_04454 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Utp25_C
AAA_19
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
WCQ91731
LinkDB
All DBs
Position
6114539..6115978
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AA seq
479 aa
AA seq
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MEFADLKLIDPLLRAIEAEGYSAPTPIQQQAIPPILEGNDVLGCAQTGTGKTAAFALPIL
QRLAQAGAPSQRGLRVLVLTPTRELAAQVGESFTTYGKNLGLRTAVVFGGVGQRPQMEAL
RRGVDVLVATPGRLLDLCSQGISPFGRLETLVLDEADRMLDMGFIHDIRRVLAMLPERRQ
TLLFSATMPPDIQKLADSILHRPVRVEVARVATTAENIDQRVVFVERSDKRAMLEHVLKD
PALRRAIVFTRTKHGANRVVQQLGRARIEAVAIHGNKSQGARERALASFKQGTTSVLVAT
DIAARGIDIEDISHVINYDLPNIPESYVHRIGRTARAGASGVALSFCDIEERPYLADIER
LIQKRLPLLSIPGIPWLQPDPRPAHQAQPQGRPQAQGRPQQQRPQGQGRPQAQGRPHQRP
QGQGRPQAQGRPQPHGHARPQGPARPQPQGRPEGQARPQPQGQPQARPQPRHDTPRADN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgccgatctcaagctcatcgacccgctgctccgcgccatcgaggccgaagga
tacagcgccccgacgcccatccagcagcaggccatcccgccgatcctcgagggcaacgac
gtcctcgggtgcgcgcagaccgggacgggcaagaccgccgcgttcgccttgccgatcctg
cagcgcctcgcgcaggccggcgcgccgagccagcgcgggctccgcgtgctcgtgctcacc
ccgacgcgcgagctcgccgcgcaggtcggcgagagcttcaccacgtacggcaagaacctc
ggcctgcggaccgcggtcgtcttcggcggggtggggcagcgcccccagatggaggcgctg
cgccgcggcgtcgacgtcctcgtggcgacgccgggccggctgctcgacctctgctcgcag
ggcatctcgccgttcgggcggctcgagacgctcgtgctcgacgaggccgaccggatgctc
gacatggggttcatccacgacatccggcgcgtgctcgcgatgctgcccgagcgccgccag
acgctcctgttctcggccacgatgcccccggacatccagaagctcgcggacagcatcctg
caccgcccggtgcgggtcgaggtcgcgcgggtcgccaccaccgccgagaacatcgaccag
cgggtggtcttcgtcgagcggtccgacaagcgcgcgatgctggagcacgtgctcaaggat
cccgcgctccgccgggcgatcgtgttcacccgcaccaagcacggcgccaaccgcgtggtc
cagcagctcggccgcgcgcgcatcgaggccgtcgccatccacgggaacaagtcgcagggc
gcgcgcgagcgggcgctcgcgagcttcaagcaggggacgacgagcgtgctcgtcgcgacc
gacatcgcggcgcgcggcatcgacatcgaggacatctcgcacgtgatcaactacgacctc
ccgaacatcccggagagctacgtgcaccgcatcggccgcacggcgcgcgccggggcgtcg
ggggtggcgctctcgttctgcgacatcgaggagcgcccgtacctcgccgacatcgagcgc
ctcatccagaagcgcctcccgctcctctccatccccggcatcccctggctccagcccgat
cccaggcccgcccatcaggcgcagccgcaggggcggccccaggcgcaaggtcggccgcag
cagcagcggccgcaagggcaggggcggccccaggcgcagggcaggccccaccagcggccg
caagggcaggggcggccccaggcgcagggcaggccccagccgcacgggcacgcccggcct
cagggaccggcgcggccccagccgcaggggcggcccgagggacaggcgcggcctcagccg
cagggacagccccaggcgcgaccgcagccgcgccacgataccccgcgcgcggacaactga
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