Sorangium sp. So ce836: NQZ70_05853
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Entry
NQZ70_05853 CDS
T11263
Symbol
pnp_2
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sorg Sorangium sp. So ce836
Pathway
sorg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sorg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQZ70_05853 (pnp_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sorg03019
]
NQZ70_05853 (pnp_2)
03016 Transfer RNA biogenesis [BR:
sorg03016
]
NQZ70_05853 (pnp_2)
Enzymes [BR:
sorg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NQZ70_05853 (pnp_2)
Messenger RNA biogenesis [BR:
sorg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NQZ70_05853 (pnp_2)
Transfer RNA biogenesis [BR:
sorg03016
]
Prokaryotic type
tRNA degradation factors
NQZ70_05853 (pnp_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
KH_2
DUF5813
Motif
Other DBs
NCBI-ProteinID:
WCQ93105
LinkDB
All DBs
Position
complement(8057584..8060088)
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AA seq
834 aa
AA seq
DB search
MVGGRALTLETGRLAKQAHGAVLVTYGDTMVLVTAVSQDERPGLDFFPLTCEFVEKTYAA
GKIPGGFFKREARQREEEILSSRLMDRPLRPLFPEGFKRDTQIIATVLSSDKQNKADVLA
LTGASAALHISDIPWHGPVVGVRVGRLEGEFVAYPTVADIERCDIDLVVACSRDAIVMVE
GGAAEATEAEIIDALMFAHETAQPVIDLIEKMRAAVGKPKREFVAPALPDDVKQRVAQIV
DEDLKAATRVTDKKARYDGYSTLKKKLTETLAAELGPEKLLPLQGLVKAEFEERKAHVVR
TYVIDEGRRIDGRDGKSIRPIMCEVGLLPRVHGSALFQRGETQAIVTTTLGTSTDEQKID
GLMGETWKRFYLHYNFPPFSTGETKPLRGPGRREIGHGALAERALSRMIPPPDQFPYTIR
IVSETLESNGSSSMAAVCGGCLSLMDAGVPIKSPVAGIAMGLIMEGQRYAVLSDILGDED
HLGDMDFKVCGTARGVTAIQMDIKIAGLSRQILMQALDQAREGRLHILNKMLETLPTTRP
ELSQYAPRITTVRVKPDQIRLIIGPGGKTIKGIVDQTGVAIDVEDDGTVNVASSDSDAVK
RALDIIKGLTAEPEVGATYKGTVKRITDFGAFIEILPNTDGLLHISEMAHTRVERVEDVL
KEGDAVDVKVLSVDRDGKIRLSRRELLPLPEGEEGDRARERMAQARDAGPPPRRDGPGGG
RGGDRDRGARGPAWSAIAAGRRRASAASAAPSHEIRAGRSCRAAAHAGLPVAHAPHRDRL
IFSVSRPRAAPAASRGARGLAWSALPRCGPARSAVRRRARGAWARPPSGFVGIR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcggccgtgccctcaccctcgagaccggccgcctggcgaagcaggcccacggg
gccgtgctcgtcacctacggcgataccatggtgctcgtgaccgccgtctcgcaggacgag
cggccgggcctcgacttcttccccctcacctgcgagttcgtcgagaagacgtacgccgcc
ggcaagatccccggcgggttcttcaagcgcgaggcgcgccagcgcgaggaggagatcctc
tcgagccgcctcatggaccgcccgctccgcccgctcttcccggaggggttcaagcgggac
acgcagatcatcgccacggtcctctccagcgacaaacagaacaaagccgacgtcctcgcc
ctgacgggcgcgagcgccgcgctgcacatctcggacatcccctggcacggtccggtcgtc
ggcgtgcgcgtgggccgcctcgagggcgagttcgtcgcgtacccgacggtcgccgacatc
gagcggtgcgacatcgacctcgtcgtcgcctgctcgcgcgacgcgatcgtgatggtcgag
ggcggcgccgcggaggcgaccgaggccgagatcatcgacgcgctgatgttcgcgcacgag
acggcgcagccggtcatcgacctcatcgagaagatgcgcgccgcggtgggcaagccgaag
cgcgagttcgtcgcgccggcgctgccggacgacgtcaagcagcgcgtcgcccagatcgtc
gacgaggacctcaaggccgcgacgcgggtgaccgacaagaaggcgcgctacgacggctac
agcacgctcaagaagaagctgaccgagaccctggcggccgagctcggccccgagaagctc
ctccccctccaggggctcgtgaaggccgagttcgaggagcgcaaggcgcacgtcgtccgc
acctacgtgatcgacgagggccggcgcatcgacggccgcgacggcaagagcatccggccg
atcatgtgcgaggtgggcctgctcccgcgcgtgcacggcagcgcgctgttccagcgcggc
gagacgcaggcgatcgtcacgacgacgctcggcacctcgaccgacgagcagaagatcgac
ggcctgatgggcgagacgtggaagcgcttctacctccactacaacttcccgcccttctcg
accggcgagacgaagccgctgcgcggccccggccggcgcgagatcggccacggcgccctc
gccgagcgcgcgctctcccggatgatcccgccgccggatcagttcccctacacgatccgg
atcgtgtcggagacgctcgagtcgaacggctcgtcgtcgatggcggcggtctgcggcggg
tgcctctcgctcatggacgcgggcgtgccgatcaagtcgcccgtcgccggcatcgcgatg
gggctcatcatggagggccagcgctacgcggtgctctcggacatcctcggcgacgaggat
cacctcggcgacatggacttcaaggtctgcggcacggcgcgcggcgtgaccgcgatccag
atggacatcaagatcgccggcctgagccggcagatcctgatgcaggcgctggatcaggcg
cgcgaggggcggctccacatcctgaacaagatgctggagacgctgccgaccacgcggccc
gagctcagccagtacgcgccgcggatcaccacggtgcgcgtgaagcccgaccagatccgg
ctcatcatcggccccggcggcaagaccatcaagggcatcgtcgaccagaccggcgtcgcg
atcgacgtcgaggacgacggcacggtgaacgtcgcgtcgtccgactccgacgcggtgaag
cgggcgctcgacatcatcaaggggctcacggccgagcccgaggtcggcgcgacctacaag
gggacggtcaagcgcatcacggacttcggcgcgttcatcgagatcctgccgaacaccgac
ggcctgctgcacatctcggagatggcccacacgcgcgtcgagcgcgtcgaggacgtcctc
aaggagggcgacgcggtcgacgtgaaggtgctgagcgtcgatcgcgacgggaagatccgg
ctgagccggcgcgagctgctcccgctgccggagggcgaggagggcgaccgggcgcgcgag
cgcatggcgcaggcgcgcgacgccggcccgccgccgcggcgcgacggcccgggcggcggg
cgcggcggcgaccgcgaccgcggcgcccgcggcccggcatggagcgcgatcgcggcgggc
cgccgccgcgcgagcgccgcgagcgccgctcctagccacgagatccgcgcggggaggtca
tgccgcgctgcggcgcacgctggcctccccgtcgctcacgcccctcacagagatcgcctg
attttcagcgtttcgcggcctcgcgcggcgcccgcggcctcgcgcggcgcccgcggcctc
gcgtggagcgcgctgccccgctgcgggcctgcgcgctcggctgtgcgccggcgcgcgcgc
ggcgcctgggctcgtccacccagcggctttgttggaatccggtga
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