Sorangium sp. So ce836: NQZ70_08619
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Entry
NQZ70_08619 CDS
T11263
Symbol
rne
Name
(GenBank) Ribonuclease E
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
sorg Sorangium sp. So ce836
Brite
KEGG Orthology (KO) [BR:
sorg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sorg03019
]
NQZ70_08619 (rne)
03009 Ribosome biogenesis [BR:
sorg03009
]
NQZ70_08619 (rne)
Messenger RNA biogenesis [BR:
sorg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NQZ70_08619 (rne)
Ribosome biogenesis [BR:
sorg03009
]
Prokaryotic type
rRNA processing factors
NQZ70_08619 (rne)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF4423
Motif
Other DBs
NCBI-ProteinID:
WCQ95842
LinkDB
All DBs
Position
11702711..11705407
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AA seq
898 aa
AA seq
DB search
MGKNLLVINVDIRETRVALIENGIIAELHLERESSKGTLGNIYLGKVSRVLPGMQAAFID
VGLERAAFLHVEDLIRPDDFEAYLAGHRRPAEEERASSRGRAARASEAPGPEESEVHELS
GAEEAAPEGPDAAAEHHEPHEGADFGADEGFEAESPLEADSPLDETSDVPIELPTALDVL
GSPSGQAFAGVGSMVTLDEADDEPVPGLDGGHEHDGADDDDEELVAAGSGSDVDEAGPEE
SGPDDAGPEEAEAEDDDELDTPAYDVEPASPPPEDAADVWSAAEERQEATSDAADRGETE
AAAETASAEPAARASGEWPSGQEAGASPAAEGAVAKAAPEAPGDEVPPAARARNGRARGR
REARVRRSGRTRDRRANLEGSSAAPEGAVATEAREAPREGRETREGRETREGRETREGRE
PREGREPREGREPRDRGGRGQQGGRDGRDREQRGRGEQRTRERGREQARDGKGKSAARGQ
QSARSWQNEPPRISKSTPIREVVREGQEVIVQVSKEPIGTKGARVTSHISLPGRYVVYLP
TVDHIGISKRIGSEKERSRLRDAIEAMKPPQGGLIVRTLAEGLTKKQLKADVGYLVRLWG
EVAKKRESGVRAPAVLYTELDLVLKTARDLFTDDIEKIVIDDREEYIRLRRFVEMFMPER
ADAVELYEGAEPIFDAYGIEDEIQRALSRKVPLPSGGHLIIDQAEALTAIDVNTGRFVGK
GSKDLEETILTTNMEAVEEIAYQLRFRNIGGLIILDLIDMERAQNREKVRRRLEELLAKD
KAKTTLNRISDLGLIEMTRKRTRESLGRTILEPCFYCDGTGQLQSKQTVAYEILRQIRRE
RMNLPGYSVVVNAHPAVIDLLKNDERIAVQEAERLFQRRIDLVPRKEYHLEQFDLQGR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaccttctcgtcatcaatgtggacatccgcgagacacgcgtcgcgctgatc
gaaaatgggatcatcgctgagctgcatctcgagcgggagagctccaaggggacgctcgga
aacatctacctcggcaaggtcagccgcgtattgcccgggatgcaggccgcgttcatcgac
gtggggctcgagcgagccgccttcctgcacgtcgaggacctcatccggcccgacgacttc
gaggcatacctggctgggcaccgccgtcctgccgaagaggagcgcgcctcctcccgaggc
cgcgccgcgcgcgccagcgaggcgcccgggcctgaagaaagcgaggttcacgagctatcc
ggcgcagaggaggccgcgcccgagggccccgacgcggcagccgaacaccacgagccccac
gaaggggcggatttcggggccgatgaagggttcgaggccgagagcccgctcgaggcggac
agcccgctcgacgaaacgagcgacgtgccgatcgagctgcccacggcgctcgacgtgctc
ggaagcccctccggccaggcgttcgccggcgtgggctcgatggtgaccctcgacgaggcc
gacgacgagccggtgccggggctcgacggcggacacgagcacgacggcgcggacgacgac
gacgaggagctggtcgcggcaggcagcggcagcgacgtcgacgaggccggtccggaggag
tcaggacccgacgacgctgggccggaggaagccgaggccgaggacgacgacgagctcgac
acgcccgcctacgacgtcgagccggcctcgccgccgccggaggacgccgccgacgtgtgg
agcgcggccgaggagcgccaagaggcgacgagcgacgccgcggatcgcggggagacggaa
gccgccgcagagaccgcgtccgcggagcccgctgcgcgcgcctccggcgagtggccgtcc
gggcaggaggcgggcgcgtcgccagccgccgagggcgccgtcgcgaaagcagcgcccgaa
gcgccgggcgacgaggtgccgccggcagcgcgggcgcgcaacgggcgcgcacgcgggcgg
cgcgaggcgcgcgtgcgccgctcgggacgaacgcgcgaccggcgcgccaacctcgagggg
agcagcgccgcgcccgagggggccgtcgccacggaagcgcgcgaggcgccccgcgaggga
cgcgaaacccgcgagggacgcgaaacccgcgagggccgcgaaacccgcgagggacgcgaa
ccccgcgagggacgcgaaccccgcgagggccgtgaaccccgcgaccggggcggacgtgga
cagcagggcggacgcgacggacgcgatcgcgagcagcgcgggcgcggcgagcagcggacg
cgagagcgcgggcgcgagcaggcgcgggacggcaagggcaagagcgccgcgcgcggccag
cagagcgcgcgcagctggcagaacgagccgccgcgcatctcgaaatcgacccccatccgc
gaggtcgtccgcgaagggcaggaggtcatcgtccaggtctcgaaggagcccatcgggacg
aagggcgccagggtcacgagccacatctccctccccggccgctacgtcgtgtacctgccg
acggtcgatcacatcgggatctccaagcgcatcggctcggagaaagaacgctcccggctg
cgcgacgccatcgaggcgatgaagccgccgcagggtgggctcatcgtgcgcacgctcgcc
gagggcctcacgaagaagcagctcaaggccgacgtcggctacctcgtgcgcctctggggc
gaggtggcgaagaagcgcgagagcggcgtgagggcgccggcggtgctctacaccgagctc
gacctcgtgctgaagaccgcccgcgacctcttcaccgacgacatcgagaagatcgtgatc
gacgaccgcgaggagtacatccggctgcggcgcttcgtcgagatgttcatgcccgagcgc
gccgacgcggtggagctctacgagggggccgagccgatcttcgacgcgtacggcatcgag
gacgagatccagcgcgcgctgtcgcggaaggtcccgctcccgtcgggcgggcacctgatc
atcgatcaggccgaggcgctcaccgcgatcgacgtgaacaccgggcggttcgtcggcaag
gggtcgaaggacctcgaggagacgatcctgaccacgaacatggaggcggtcgaggagatc
gcctatcagctcaggttccgcaacatcggcgggctgatcatcctcgacctcatcgacatg
gagcgcgcccagaaccgcgagaaggtgcgccgccgcctcgaggagctgctcgccaaggac
aaggcgaagaccacgctgaaccggatctccgatctcggcctcatcgagatgacccggaag
cggacgcgcgagagcctcgggcgcaccatcctcgagccgtgcttctactgcgacgggacg
ggccagctgcaatcgaagcagaccgtcgcgtacgagatcctgcggcagatccggcgcgag
cggatgaacctgcccggctactcggtcgtggtgaacgcgcatccggccgtgatcgacctc
ctgaagaacgacgagcgcatcgccgtgcaggaggcggagcggctgttccagcgccggatc
gatctcgtgccccgaaaggagtaccacctcgagcagttcgatctgcaaggcaggtaa
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