Sorangium sp. So ce836: NQZ70_08650
Help
Entry
NQZ70_08650 CDS
T11263
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sorg Sorangium sp. So ce836
Brite
KEGG Orthology (KO) [BR:
sorg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sorg03009
]
NQZ70_08650 (rlmCD)
Enzymes [BR:
sorg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NQZ70_08650 (rlmCD)
Ribosome biogenesis [BR:
sorg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NQZ70_08650 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
MTS
Methyltransf_25
Methyltransf_31
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WCQ95873
LinkDB
All DBs
Position
complement(11741722..11743104)
Genome browser
AA seq
460 aa
AA seq
DB search
MKAVHRRSSGARARAGERAQLRIDALAAGGAGIGRLAGEVVFVPATAPGDLVEVELDRSA
RPARGRLLRVVEPSADRIAPPCRFAETCGGCDWMHVRVEAQQAAHAQIVRQAIARAASLA
EADLPPLRLHPAPQPLGYRSRARLFARAERGEVRVGYRAPRTHAVAAVDRCLVLADPIAP
LAGELPGVLRGAAGEGDILVSLGASSRPVVEILWRGQLPPAVWQLLDERTARGAWAGARV
TLDGAREAASFGDPRPAVVGADGLPLVLAPGGFGQPSEEGAAVLAGRAAELAHLDSSRPP
HVLELFAGSGTLSVLLARGAPRPAQSAEVASPAAPGLASFTAVERAPEAVACLRQNLAAR
GLAGKAIEADADQVPIPARTDVVVLDPPRGGAPGAARAIAASGARVVVYVSCDPATLGRD
LGGILRGGFEITDIEAVELFPQTSHIESIVRLTRARRPAR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgttcaccgccgctcgagcggtgccagggcgcgcgccggcgagcgagcgcag
ctgcgcatcgacgcgctggccgccggcggcgcagggatcggtcggctcgcgggcgaggtc
gtcttcgtccccgcgacggcgccgggcgacctcgtcgaggtcgagctcgatcggagcgcg
cgcccggcgcggggcaggctgctccgcgtggtcgagccgagcgccgaccgcatcgccccg
ccctgccgcttcgcggagacctgcggcggctgcgactggatgcacgtccgcgtcgaggcg
cagcaggccgcgcacgcgcagatcgtccggcaggcgatcgcgcgcgcggcctcgctcgcc
gaggccgatctgccgccgctccgcctgcaccccgcgccccagccgctcggctaccgctcg
cgcgcgcggctgttcgcgcgcgcggagcgcggcgaggtgcgcgtgggctaccgcgcgccg
aggacgcacgccgtcgcggcggtcgatcgctgcctggtgctggccgacccgatcgcgccg
ctcgccggcgagctgcccggcgtcctgcgcggggccgcgggggagggcgacatcctcgtc
tcgctgggcgcctcgagccgcccggtggtcgagatcctctggcgcggccagctcccgccg
gccgtgtggcagctgctcgacgagcgcacggcccgcggcgcgtgggccggcgcccgcgtc
acgctggacggggcgcgcgaggccgcgtcgttcggcgatccgcggccggcggtcgtgggc
gccgacggcttgccgctggtcctcgcgccgggtggcttcgggcagccgtccgaggagggc
gccgccgtgctcgccggccgcgccgccgagctcgctcacctcgactcctcccggccgccg
cacgtgctggagctgttcgcggggagcgggacgctctccgtgctcctcgcgcgcggcgcg
ccgcgacccgcgcagtccgccgaggtcgcctcgccggccgccccggggctcgcgtcgttc
acggcggtggagcgcgcgcccgaggcggtcgcgtgcctgcggcagaacctcgccgcgcgc
ggcctcgccggcaaggcgatcgaggcggacgccgaccaggtcccgatcccggcgcgcacc
gacgtcgtggtgctggatcctccgcgcggcggggcgcccggcgcggcgcgcgcgatcgcg
gcctcgggcgcgcgcgtggtcgtctacgtctcgtgcgacccggccaccctcgggcgcgat
ctcggcggcattctccgcggcggcttcgagatcacggacatcgaggcggtcgagctcttc
ccgcagacgagccacatcgagtcgatcgtccgcctcacccgcgcccgccggccggctcgc
tga
DBGET
integrated database retrieval system
