Sorangium sp. So ce836: NQZ70_09611
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Entry
NQZ70_09611 CDS
T11263
Symbol
yagF
Name
(GenBank) D-xylonate dehydratase YagF
KO
K22396
xylonate dehydratase [EC:
4.2.1.82
]
Organism
sorg Sorangium sp. So ce836
Pathway
sorg00040
Pentose and glucuronate interconversions
sorg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sorg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NQZ70_09611 (yagF)
Enzymes [BR:
sorg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.82 xylonate dehydratase
NQZ70_09611 (yagF)
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
WCQ96824
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Position
13004033..13005967
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AA seq
644 aa
AA seq
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MSRDPVFESGSEAIYALRTTAPGPSGRLPLGAEQLRAMSSGELFGWTQNAGMGWDPARLR
GKQFLVLSTQGGIRAPDGTPIALGYHTGHWEVGLLMEEAARTFTASGAIPFAGYVSDPCD
GRTNGTVGMLDSLPYRNDAAIVFRRLIRSLPTRRGVLGVATCDKGLPAMLMALAGTLDLP
TVLVPGGVTLLAEEAEDTAKVQTLAARYARGEVSLDYAAEMGCRACGSPGGGCQFMGTAA
TSQVVAEALGLALPHGALSPSGAEIWRDLARRSAHALMALEGRGVTTRDIVTDDSIHNAM
VLHAAVGGSTNLVLHVPAIAHAAGLRRPTVDDWARVNALVPRLVDVLPNGPRHHATVQVF
LAGGVPEVMLHLRELGLLRLGARTVSGRTLGENLEWWERSERRRRLRDKLQQLDGIDPDD
VIMSAGKARERGLTSTVTFLRGNLAPEGALVKSTAIAPQVIGPDGVYLHEGPARVFGSED
AAIEAIKTGAVQPGDVMVLIGIGPGIGMPETYQITSALKHVRDGHRIALVTDGRFSGVST
GACIGHVSPEAWAGGPIGRVRDGDRVRLRIDTRKLEGTVDVVGVDAGGFAARVPNPALQP
DGRVSADTRLWAALQDASGGSWGGCVYDAERIIGLLGRAIAAER
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgatccggtgttcgagtccggcagcgaggcgatctacgccctgcgcaccacc
gcgcccggaccgtcggggcgcctcccgctcggggccgagcagctgcgcgccatgtccagc
ggcgagctgttcggctggactcagaacgccgggatggggtgggatcctgcgcgcctgcgc
gggaagcagttcctcgtgctcagcacgcaggggggcatccgcgcgcccgacggcacgccg
atcgcgctcggatatcacacgggacactgggaggtggggctgctcatggaggaggcggcc
cgcacgttcacggccagcggggccattccgttcgccggctatgtcagcgatccgtgcgac
gggcggaccaatggcaccgtcggcatgctcgacagcctcccttaccgcaatgacgccgcg
atcgtatttcgaaggctgatacgctcgctgcccacccgaagaggcgtgctcggcgtcgcc
acctgcgacaagggcttgccggccatgttgatggcgctcgccggcaccctcgacctcccc
acggtgctcgtgccgggaggcgtcacgctcctcgcggaggaggcggaggataccgccaag
gtccagaccctcgcggcccgctatgcgcgcggggaggtgagcctcgactacgccgccgag
atgggctgccgcgcctgcggctcccccggcggcggctgccagttcatggggacggccgcg
acgagccaggtggtggcggaggcgctcggcctcgccctcccgcacggcgcgctcagcccg
tcgggcgccgagatctggcgcgacctcgcccgccgttccgcgcacgcgctcatggccctc
gagggacgcggcgtgaccacgcgggacatcgtcaccgacgattccatccacaacgcgatg
gtgctgcacgccgccgtcggcgggtcgaccaacctggtgctccatgtgccggcgatcgcc
catgcggccgggctccggcgccccacggtggacgactgggcgcgcgtcaacgccctcgtt
ccgcgcctcgtggacgtgctgcccaacgggccgcgacaccatgccacggttcaggtcttc
ctcgcgggaggcgtcccggaggtcatgctccatctgcgcgagcttggcctgctgcggctc
ggtgcgcgcaccgtcagcggtcggaccctgggcgaaaatctcgaatggtgggagcgcagc
gaacggcgccggcgcctgcgcgacaagctgcagcagctggacggcatcgacccggacgac
gtgatcatgtccgccgggaaggcgcgcgagcgcggcctcaccagcacggtgacctttttg
cgcggcaacctcgcgcccgagggagcgctcgtgaagagcaccgccatcgctccccaggtg
atcggaccggacggcgtttatctgcacgaagggcctgcgcgcgtgttcggcagcgaggac
gcggcgatcgaggcgatcaagacgggcgccgtgcaaccgggtgacgtgatggtgctgatc
ggcatcggccccggtatcggaatgccggagacctaccagatcacctccgccctcaagcac
gtgagggacgggcaccgcatcgccctggtcacggacggtcgtttttccggcgtctccacc
ggggcgtgcatcggccacgtcagcccggaggcttgggcgggtgggcccatcggccgcgtg
cgcgacggcgaccgcgtccggctccggatcgacacgcgcaagctggaggggacggtggac
gtcgtgggcgtggatgccggcggttttgccgcccgtgtccccaatccagcccttcaaccc
gacggccgagtgagcgcggacacgcgactatgggctgcgcttcaggatgccagcgggggc
agctggggtgggtgcgtttatgatgccgaacgcatcatcgggctcctcggtcgcgccatc
gcggcagagcgctag
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