Streptococcus oriscaviae: INT76_00740
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Entry
INT76_00740 CDS
T08170
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sos
Streptococcus oriscaviae
Pathway
sos02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sos00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
INT76_00740 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sos03021
]
INT76_00740 (rpoD)
Transcription machinery [BR:
sos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
INT76_00740 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DBD_HTH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
QUE54457
UniProt:
A0ABX7YKV8
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All DBs
Position
147937..149058
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AA seq
373 aa
AA seq
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MTSKKADKKTEVTTFDVQVADFIRNHKKEGTAIDDEINDKLVIPFTLDADGIDDLLQRIQ
DAGISIIDKSGNPSARVMQVEEEPELSDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEE
EQELALAVEAGDPEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFD
YSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTP
EQIAERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVL
REQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRH
PSRSKPLRDFIED
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaaaaaagcagataaaaaaacagaagtaacgacctttgatgttcaagtagcg
gactttatccgcaaccataaaaaggaaggtacagctattgatgatgaaatcaatgacaag
ctggttattccatttactttggatgctgatggcattgatgacttgttgcaacgcattcaa
gatgcaggaatttcaattattgataaatccggaaaccctagtgctcgcgttatgcaagta
gaagaagaacctgaactgagcgatgaagagttgctgggcagcaattctgccaaggtcaac
gacccagtccgcatgtacctgaaagaaatcggggttgtgcctcttttgaccaacgaagaa
gagcaagaactggccctggctgttgaagctggggatcctgaagccaagcagcgtctggca
gaagctaacctgcgtctggtggtttctattgctaagcgctatgtaggccgcggtatgcag
ttcctagatttaattcaagaaggaaatatgggtctcatgaaggcggtcgataaatttgac
tactcaaaaggtttcaaattctcgacctatgcaacttggtggatccgccaggccattacc
cgtgccattgcagaccaagccagaactatccgtattcctgtgcacatggttgaaaccatc
aacaaattggtgcgggaacaacgcaacctcctgcaagaattgggacaagacccaactcca
gaacaaattgcagaacggatggatatgacgcctgataaggttcgtgaaatcctcaagatt
gctcaagaaccagtttccttggaaacgccaattggcgaagaggatgatagccacttgggt
gactttatcgaggacgaagtgattgaaaatccagtagattatacgactcgtgttgttctc
cgtgagcaactggatgaggtcctggataccctgaccgaccgagaagaaaatgtcctccgc
ctgcgcttcggactggatgatggaaaaatgcgtaccctagaagatgtgggcaaggtcttc
aatgtgacccgcgaacgcatccgccaaatcgaagccaaagccctccgcaagctccgccac
ccatcccgcagcaaaccactcagagactttattgaggattaa
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