KEGG   Streptococcus oriscaviae: INT76_05855
Entry
INT76_05855       CDS       T08170                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sos  Streptococcus oriscaviae
Pathway
sos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    INT76_05855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sos03019]
    INT76_05855
Messenger RNA biogenesis [BR:sos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     INT76_05855
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 pre-PUA_NIP7 DUF4453 Permuted_GreAB-C
Other DBs
NCBI-ProteinID: QUE53407
UniProt: A0ABX7YI01
LinkDB
Position
1158941..1160620
AA seq 559 aa
MSSVNLKPQEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDELLGIDYVIPDYS
YIVDNLDRVKGLVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLLRDAT
LHEINHKTELTFKKLKISIFRTTHSIPEPLGVVIDTPQGKIVCTGDFKFDFTPVGEPADL
HRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKLIEDIHGRIIFASFASNIFRL
QQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKEYPASEIMILCT
GSQGEPMAALSRIAHGTHRQVQLQPGDTVIFSSSPIPGNTTGVNKLINILIEAGVEVIHG
KINNIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKIHAGLAVDTGVPKENIFIMEN
GDVLALTKKTARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFQSQ
MILAGPDILSRGFIYMRESGELIRESQRVLFNAIRIALKNKDANIQTLNGAIVNALRPFL
YEKTEREPIIIPMILTPDK
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgtcatcagtcaatctaaaacctcaagaagttggcgtttttgccatcggtggtttggga
gaaatcgggaagaacacttacggcattgaataccaagatgaaattatcatagtggatgct
ggtatcaaattccctgaagatgaactactgggcattgactacgttatccctgactactct
tatatcgtcgacaatctggatcgagtaaaaggcttggtcattacccatggtcacgaagac
catatcggcggaattcccttcctcctcaaacaagccaacatccctatctacgccggtcct
cttgctcttgccctcatccgaggcaagttagaagaacacggcctcttacgggatgcgacc
cttcacgaaatcaaccacaagacagagctgactttcaagaaactcaaaattagcatcttc
cgcaccactcactctatcccagagcccttaggtgtggtcattgacaccccgcagggcaag
attgtctgcacaggcgacttcaagtttgacttcactcccgttggtgaacctgcagacctc
caccgcatggccgctctcggagaagaaggcgtcctttgcttgctctcagactcgaccaat
gctgaggtgccgacctttaccaattctgaaaaggtcgtcggtcaatctattatgaagtta
atcgaagacattcacggtcggatcatcttcgcatcctttgcctccaacatcttccgtctc
cagcaagcagcagatgccgctgtcaaaactggtcgtaagattgcagtctttggccgttcg
atggaaaaggccattgttaacgggatcgaactgggctatatcaaggttccaaaaggcacc
tttattgagcctaatgaaatcaaggaataccctgccagcgaaatcatgattctctgtacg
ggaagccaaggagagccaatggctgccctctctcgtatcgctcatggtacccaccgtcag
gttcagctccagcccggagatacagtcatcttctcctcaagccctattccaggaaatacc
actggcgttaacaaacttatcaacattctgattgaagctggggttgaggtcatccacggc
aagattaacaacatccacacctctggacacggtggtcagcaggaacaaaaactcatgctc
cgcctcattaaaccaaaattcttcatgcctgttcacggagagtaccgcatgcagaaaatc
catgcaggtctggcggttgatactggtgttccgaaggaaaacatcttcatcatggaaaac
ggggacgttctagccctaactaaaaaaactgcccgcattgccggccatttcaatgcacaa
gacatctatgtcgatggcaatcgcattggcgaaatcggcgctgctgtcctcaaggatcgt
agagatttatcagaagacggtgttgtccttgctgtcgcaacagtggacttccaatcccag
atgattcttgccggcccagatattctcagccgtggcttcatctatatgcgcgaatctggc
gaactcatccgagaaagccagcgcgtcctcttcaacgctatccgtatcgccctcaaaaat
aaggatgccaacatccaaaccctaaacggcgctattgtcaacgccctcagacccttctta
tatgaaaaaaccgagcgtgaacccatcattattccgatgatactcactcccgataaatga

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