Solanum tuberosum (potato): 102577515
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Entry
102577515 CDS
T02981
Name
(RefSeq) RRM-containing RNA-binding protein-like protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102577515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102577515
Spliceosome [BR:
sot03041
]
Complex B
Other components
Prp19-related factors
102577515
Complex C
102577515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
RRM_occluded
zf-CCCH_2
zf-CCCH_10
zf-CCCH_12
zf-CCCH_3
zf-CCCH
zf-CCCH_4
RRM_YTH1
zf-CCCH_PARP12
RRM_3
Motif
Other DBs
NCBI-GeneID:
102577515
NCBI-ProteinID:
NP_001275069
UniProt:
Q2PYX8
LinkDB
All DBs
Position
Un
AA seq
487 aa
AA seq
DB search
MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR
DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE
EHDRRARAGIDYESSYGKVRANDTILKLQRTTPYYKRNRAHVCSFYIRGQCTRGLECPYR
HEMPETGELSQQNIKDRYYGVNDPVAMKLLNKAGEMPSLEPPDDESIRTLYVGGVDARIS
EQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTREGAVKAAEELANKLVIKGLRLKLLWGR
PQAPKPDTELSDEARQQAAVTHSGLLPRAVISQQQNQLPPPPGTQEQPPQPMPYFNIPPM
LQQERAYYPSMDPQRMGAIVSSQDGASSSAAGSGPENKIGSEKHPQGQHYAYPPVPPPQG
QFYPPYYPPPPMGICHHHRLHIISSIPRLIKLPDHLPQLLPVSKLLISRSLNQQELQHNN
LNFECFV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgcataggttgcttagagatgcagaagcagatggatgggagcgatctgattttccg
attatatgtgagtcttgtctcggggatagtccttatgtgcgaatgacgaaagcagattat
gacaaggagtgcaagatatgcacacgacccttcacagtgttcagatggagacctggtcgg
gatgcaagatacaaaaaatctgagatctgtcagacctgcagcaagttgaagaatgtttgt
caagtttgtcttttggatcttgagtatggtttgccagttcaggtccgagacactgctctc
agtatcaattctaatgatgcaattcccaagagtgacgttaatagagaatatttcgcagag
gagcatgaccgcagggcaagagcagggattgattatgaatcttcatatggaaaagtccgt
gcaaatgacactattttgaagctccaaagaacaacaccatactacaagagaaatcgggca
catgtttgcagtttctatatacgtggtcaatgcacaagaggtttggagtgcccttatagg
cacgaaatgccagagactggggagttgtcacagcaaaacattaaggaccgttactatgga
gttaatgatcctgtggcgatgaagctacttaataaggcaggtgaaatgccttcattggag
ccccctgatgatgagagcattagaaccctctatgtgggtggtgttgatgcaagaatcagt
gagcaggacctaagggaccagttttacgcacatggagaaatcgagtccattaaaatggtg
ttgcagcgtggttgtgcttttgtaacctacactacaagagaaggtgcagtgaaggcggct
gaggaactagcgaacaagctagtgataaagggcttgagactgaagctgctctgggggaga
ccacaagctcctaaaccagacaccgaactgtctgatgaagcaaggcagcaggctgcagtg
actcacagtggattgttgcccagagctgtcatatcacaacaacagaaccagcttcctcca
cccccaggcactcaggaacaacccccacaaccgatgccatacttcaacatcccgccaatg
cttcagcaggaaagagcatattatccgtcaatggatcctcagaggatgggtgccatagtt
tcatctcaggatggggcttctagttcagctgcagggtcagggcctgaaaacaagattggt
tctgagaaacacccacaaggacaacactatgcatatccaccggtgcctccacctcaaggt
caattttacccaccttactatccaccaccacctatgggtatatgccaccaccaccgcctc
cacattatcagcagtatcccccgccttatcaagctgccagaccacctcccccaactccta
ccggtgagcaagctgcttatcagcagaagcctcaaccagcaggagctgcagcacaacaac
cttaattttgagtgttttgtctaa
DBGET
integrated database retrieval system
