Solanum tuberosum (potato): 102577517
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Entry
102577517 CDS
T02981
Name
(RefSeq) 3'-5'-exoribonuclease/RNA binding protein-like protein
KO
K12586
exosome complex component RRP43
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102577517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102577517
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102577517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102577517
NCBI-ProteinID:
NP_001275073
UniProt:
Q2PYZ2
LinkDB
All DBs
Position
Un
AA seq
314 aa
AA seq
DB search
MAAANGSSDLSSEMEVDAFRRLFPLRYHEHHLLKSVRPDARKLGSARDTTLALGAVASAD
GSALAKIGSTTMLAAIKMEVMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAASVIS
KQLSDTILSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLNIP
VVSLNDDGRIVLVSEDTVRLKLEKEPVNTEKRKLKLNSLPFSLTCILHKNYILADPTAEE
EPIMETIVTVVLDSSHQLVSLNKPGGPVLSHTSVIQDCIGLARRRAKELQSVLNEAISDM
EVGLKCDDYTIHSC
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccaatggctcaagtgacttgtcttcagagatggaggtggatgcatttaga
cgtctttttcctttgcgctatcatgaacatcatcttcttaaatctgtccgacctgatgcc
cgaaagcttggaagtgctagagatacaacacttgcacttggtgctgttgcatctgccgat
ggatccgcactggcgaagattggctccactacgatgctggctgccatcaaaatggaagtc
atgacaccaacagtggaatgtccagatgagggatccatagctatcgaattccacatgcct
cctatttgttctcccctggttcggcctggtaggcctgcagaggcagcatctgtaatttca
aagcagctgtcagacactatcttgagttctggcatgattgacttaaaagagttgtgcttg
gttggaggaaaagctgcttggatggcctacctggacatttactgtttggatgctgacggt
gccctgtttgacactgcattactatctgcagttgctgccttttcgcatttgaacattcca
gtagtgtctttgaatgatgatgggcgaatagtccttgtttctgaggacactgtccgattg
aaattggagaaggaacctgtaaatacagagaaaagaaaactcaaattgaactctctacca
ttctccttaacatgcatacttcacaagaactacatcctcgcagatcctacagcagaggaa
gaacctataatggaaacaattgtaaccgtggtattggattcgtctcaccagcttgtttca
cttaataaaccaggtggaccagttctttcccatacatcagttatccaggattgcattgga
ctggcaagacgcagagcgaaggagcttcagagtgtcttgaatgaagctatttctgatatg
gaggttggcctcaagtgtgatgactatactattcattcctgctga
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