Solanum tuberosum (potato): 102578568
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Entry
102578568 CDS
T02981
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102578568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sot03009
]
102578568
Enzymes [BR:
sot01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
102578568
Ribosome biogenesis [BR:
sot03009
]
Eukaryotic type
90S particles
Other 90S particles
102578568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
NIF
Motif
Other DBs
NCBI-GeneID:
102578568
NCBI-ProteinID:
XP_006356609
UniProt:
M1D768
LinkDB
All DBs
Position
Un
AA seq
278 aa
AA seq
DB search
MVRAYKVKGEKRKKKGENYDKEEEIEVPLEEEESTKRVKTEHTAADTEAAERVVDLLSGI
PVVAADQTNKAGVIFIIERASLEIAKIGKTYQLLNSDEHSNFLKKNGRNPSDYRPDIAHQ
AMLSILDSRVNKAGRLKALYVRTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAV
GKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQDYVNGVNNDTNLVFVVGAMAHG
KIDKDYVEDYLSISDYPLSAAYCISMITNAMERKWKIL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcgtacaaagtaaaaggggagaagagaaaaaagaaaggagagaattatgat
aaagaagaagaaattgaggtacctttggaagaggaggaatcaacaaaaagagtgaagaca
gaacacactgcggcagacacggaggcagctgaaagagttgtagatttactatctggcatt
cctgttgttgcagctgatcaaaccaataaagctggtgttattttcatcattgaaagagct
tctcttgaaattgctaaaattggaaagacgtaccaacttctgaattctgatgaacactcc
aactttctgaagaagaatggtcggaacccttctgattatcggcctgatattgcgcatcag
gcaatgctttcaattttagatagccgagtaaataaagctgggcgactgaaagctttgtat
gtgaggactgagaaaggtgtcctttttgaagtaaaacctcatgttcgtatccctaggaca
tttaagagatttgctggcatcatgttgcagctgctacaaaagctgagcataactgctgtt
ggtaagcgagagaaactgttgcgtgttataaaaaaccctgttacacagtacctacccatc
gactgtcggaagataggcttctctcatagttctgagaagctggtggatattcaggactat
gttaatggcgtcaacaatgacacgaaccttgtttttgtggttggggctatggcccatggg
aaaattgataaagattatgtcgaagattatttgtcgatttcagattatccgttgagtgct
gcatactgcatatcaatgatcacgaatgccatggagcgcaaatggaagattttgtag
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