Solanum tuberosum (potato): 102578719
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Entry
102578719 CDS
T02981
Name
(RefSeq) protein GIGANTEA-like
KO
K12124
GIGANTEA
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
102578719
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NCBI-GeneID:
102578719
NCBI-ProteinID:
XP_006361616
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Position
Un
AA seq
1171 aa
AA seq
DB search
MASSSTRWIDSLHFSSLFWLPPQDAEQRKDQITAYVKYFGQFTSEQFPEDIAELIRNRYP
SKENRLFDDVLATFVLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFASFISLVCSRSEK
EYSEQWALACGEILRILTHYNRPIFKVDRQDNGTDRSTSGSHTSTSKSSCSEPGVPSIQH
ERKPIRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGDLKPPSSAASRGSGKHPQL
LPATPRWAVANGAGVILSVCDEEVSRYETATLTAAAVPALLLPPPTTPMDEHLVAGLPPL
EPYARLFHRYYAIASPSATQRLLVGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGLRL
PRNWMHLHFLRAIGIAMSMRAGIAADSAAALLFRVLSQPALLFPPLRQIEEIEVQHEPLG
GDTSCNKKQREVTAAEATVEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSAVD
LPEIVVATPLQPPILSWNLYTPLLKVLEYLPRGSPSETCLMKIFVATVEAILQRTFPPDS
SREETRKTRYVFGPAFKNLAVAELRTMVHSLFLESCASVELASRLLFVILTVCVSHEAKP
NGNKRPKGEDSHPPSEIGVDTPATIGKQRPIGSKKVKKQGPVAAFDSYVLASVCGLSCEL
QLFSMISRGPNHPDPKIIMDEAKPANDSSNELRNGIHSAVSHTRRMLEILEALFSLKPSS
VGTSWSFSSNEIVAAAMVAAHISDLFKRSKACMHSLSILIRCKWDNEIHSRASSIYNLID
IHSKTVASIVNKAEPLEAYLIHAPVLKERPRCLNGKKHYKYTSRNCLTSEQPSGPLCKDS
YDCKSSLVCEKASDSSSHSSEIAGCTISKVFANFSLDATDLANFLTKDRHFGFNCNAQDL
LKSVLAEKQELCFSVVSLLWHKLIASPETQPIAESTSAQQGWRQVVDALCNVVSAAPGKA
ATAIVLQAERELQPWIAKDDDLGQQMWRINQRIVKLIAELIRNHDIAESLVILASNPDLL
LRATDGMLVDGETCTLPQLELLEVTARAIQPVLDWGESGQSVADGLTNLLKCRLPATVRC
VSHPSAHVRALSTSVLRDIMYAGSVKPSAKQAADVNGIHNPAYQYLGISISDWKADIEKC
LMWEANSRLENGMSAQFLDTAARELGCTISV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaagcacaaggtggattgatagtcttcatttctcttcattattttggctt
cctccacaagatgcagagcagcggaaggatcaaattaccgcgtatgttaagtactttggt
cagttcacatcagaacaatttcctgaagatatagctgagctcatacggaaccggtatcca
tcgaaggagaaccgactttttgatgatgttttagcaacttttgttcttcatcacccggag
catgggcatgctgtagttcatccaattatttcatgcatcattgatggtacactggagtat
gataaaagtagtccaccttttgcttcttttatatcattggtttgctcaaggagtgagaag
gaatattctgaacaatgggctcttgcatgtggagagattttacgtatactaacacactac
aaccgcccaattttcaaagttgatcgtcaggacaatggaacagatagaagcaccagtgga
agccacacttcaacaagtaaatcttcctgtagtgaacctggtgtgccttctatacaacat
gagagaaaacctataagaccattgtctccatggatcactgatatattgcttgctgcgcca
ctagggattagaagcgattacttccgttggtgtggcggtgttatgggaaagtatgctgct
ggagatctcaagcccccatcaagtgctgcttctcgtgggtctgggaagcatccacaacta
ctgcctgcaactccaaggtgggctgttgctaatggtgctggcgttattttaagtgtttgt
gatgaggaagtttctcgctacgagactgctaccttgactgcagccgctgttcctgcactt
ctgcttccacctccaacaacgcctatggatgagcacctcgttgcaggactaccaccactt
gagccatatgcacgtttatttcatcgatattatgcaattgcaagtccaagtgccacacag
aggcttcttgttggacttttagaagctccaccatcttgggctccggatgcacttgatgct
gcggtacaactagtggaacttctgcgagcagctgaagattatgcatctggattgcgtctt
cctaggaattggatgcacttgcatttcttgcgtgcaattggaattgccatgtccatgaga
gcaggaattgctgcagattctgcagcagctttacttttccgagtactttctcaacctgct
ttgctattcccccccttgaggcaaattgaagaaattgaagttcaacatgaacctctgggt
ggcgacacttcatgtaataaaaagcagagagaagtgactgctgcagaagccacagtagaa
gccactgcccaagggattgcatcaatgctttgtgcacatggtccggaggttgaatggaga
atatgtaccatctgggaagctgcttatggattgattcctttaagttcatctgcagttgat
ctccctgagattgtagttgccacccctttacaaccacccattttgtcatggaacctgtat
acaccccttcttaaggttcttgagtatcttcctcgtgggagtccatctgaaacttgtctt
atgaaaatatttgttgcaaccgtcgaagcaattcttcagagaacgttcccgcctgattcc
tctagagaagaaaccagaaaaaccagatatgttttcggccctgccttcaaaaatcttgct
gtggcagaactgcgaaccatggttcattcattgttcttggagtcatgtgcctctgttgag
cttgcatctcgactactttttgttatcttaacagtatgtgtcagtcatgaagcaaaacca
aatgggaataaaaggcctaaaggtgaagattctcacccacctagtgaaatcggggtagac
actccggcaaccatcggaaaacaaagaccaataggaagtaagaaagtgaaaaaacaagga
cctgttgcagcatttgattcttatgtccttgcttctgtctgtggactttcttgcgaactt
cagctcttcagtatgatttcaagagggcctaatcatccagatccaaaaatcatcatggat
gaagccaagcctgcaaatgattcatctaatgagctacgaaacgggattcattctgccgtc
tctcatactcggaggatgttggaaattctagaggcacttttttctcttaaaccatcatct
gttggaacctcatggagcttcagctcaaatgagatagttgctgcagctatggtagctgct
catatttctgatctgtttaaacgctccaaggcctgcatgcactctctttctattttgata
cggtgcaagtgggataatgaaattcattccagggcatcgtcaatttataacctaattgat
attcatagcaaaactgttgcatcaattgtcaacaaggctgaaccattggaagcttatcta
atacatgcaccagttctgaaggagcgacctagatgcttgaatgggaaaaagcattataaa
tacactagtcgtaattgcttaacatcagaacagccatcagggcctctgtgtaaagactcc
tatgattgtaaaagttcacttgtgtgtgagaaagcttcagactcaagttcacactctagt
gagattgctgggtgcaccatcagcaaagtgtttgcaaatttctccttggatgctacagac
ttggccaattttcttacaaaggacaggcattttggatttaattgcaatgcacaagatctt
ttaaaatcagtacttgcggagaaacaagaattatgtttttctgttgtctcattgctctgg
cacaagttgattgcatcacctgaaacacaacccattgcagaaagcacttccgcccagcaa
ggatggagacaggtggttgatgcactatgcaatgttgtatcagcggcacctggaaaagct
gcaacagccattgttcttcaggctgagagggaattgcaaccatggattgctaaagacgat
gaccttggtcagcaaatgtggagaattaaccaacgtatagtaaaattgatcgcagaactg
ataaggaatcatgatatagcagaatctttggtaattctggctagtaacccagacctcctt
ttacgggccacagatgggatgcttgtcgatggagaaacatgcaccttaccacagctggag
cttttggaagtgacagctagagcaattcaaccagtgcttgactggggagaatctggacag
tcagttgctgatggcctcacaaacctattgaagtgtcgcttacctgccacagttcgctgt
gtttctcatccaagtgcacatgtccgtgctctcagtacatcagttcttcgtgacattatg
tatgctggttcagtaaaaccaagtgccaaacaagcagcagatgtaaatggcatccacaat
cctgcttatcagtaccttggcataagcatcagtgactggaaagcggatattgagaagtgt
ttgatgtgggaagctaatagccggcttgaaaatggaatgtctgctcaatttcttgatact
gctgctagggaattaggctgtactatatcagtctga
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