Solanum tuberosum (potato): 102578835
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Entry
102578835 CDS
T02981
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102578835
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sot01002
]
102578835
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102578835
03036 Chromosome and associated proteins [BR:
sot03036
]
102578835
Peptidases and inhibitors [BR:
sot01002
]
Metallo peptidases
Family M1
102578835
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102578835
Coactivators
SAGA/TFTC/STAGA complex
102578835
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102578835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
102578835
NCBI-ProteinID:
XP_006341646
LinkDB
All DBs
Position
Un
AA seq
1508 aa
AA seq
DB search
MAKARKGKSEEQKGDNSEAVVRHQKLCLSIDMDKRRIYGYTELDVVVPENGILGLHADNL
VIDSVTVDGEPTEFEVFPHYLALENGDRWCSVSSVTSAADAAGSVYLSHLDRELLSNLLI
MCKKPAEHDIERQEMHLENGVNSSAENNQNVKKVRIDYWVEKAETGIHFDGDVLHTDSQI
RRARCWFPCMDDNLQCCCYDLEFTVASNLVAVSTGSLLYQIWTKDVPARKTFVYRLSTPV
NARWISLAVAPFEILPDSNITHLSHICLPADLTKLRHTVGFFHSAFSYYEDYLSASFPFG
SYTQVFIPPEIAISSASIGASLSIFSSQFLFDGKVINKTIDTRIKLAYALARQWFGVYIT
PEAPNDDWLLDGLAGFLTDMFIKRFLGNNEARYRRYKANIAVCRADDSGATALSAVAASK
NLYGTQCIGLFGKIRSWKSVAILQMLEKQMGPESFRKILQQIVSRAQDVNRLLRTLSTKE
FRHLANKVGNLERPFLKEFFPRWVGSCGCPVLKMGFSYNKRKNMVELAILRESTARFDSS
DTMSNGKPDSEKQEGDGWPGMMSIRVHELDGMYDHPILPMTGEPWQLLEFQCHSRLAAKR
FQKTKKSSKPDGSDDNGDAVANVDMRATSDSPLLWLRADPELEYLAEIHLNQPVQMWINQ
LEKDRDVVAQVQAIATLEALPHLSFSVVNALNNFLGDSKAFWRNRIEAAFALAGTASEET
DWAGLTHLVAFYKTRRFDANIGLPKPNDFRDFQEYFVLEAIPHAIAMVRAADQKSPREAV
EFVLQLLKYNDNSGNPYSDVFWLAALVQSIGELEFGQQSIVYLSSLLKRVDRLLQFDRLM
PSYNGILTISCIRSLTQIALKLSEFVPLDRVIELINPFRTSKTLWKVRVEASRSLLDLEF
QRNGIDAALALFIRYLDEEPTLRGQVKLGVHAMRLCQIRNESDFDSDVKGEILVSLLRLL
ESSISFNNVILRHYLFCILQVLARRAPTLYGVPKDETLRMGHAAFCSNLKNIFADLVKQS
KPPECPLENLEDILDDSAIADALPGNENAKGATISVPDSLFVSEVQKDTEDALLSNEIVN
TATGAIPDSLVVTEVQNETDLLNYRHGVMHPVGDLPLASSADPCREEPVLSDNEQTKPMV
SLLHETGGMSMGPPTTDNLGSRDQGQPVINLGRDNPGISEPIREPDTVSASFERKKPVFK
IKVRKTVTSSRAEDNENVTMDKSQDDFRDVDRGASSSVSVDAPQRNVVELLSSGGNQFPE
DVNSCHDVGSHVTASIGSAKVAVEVEELTKELQCTAESSKVSLVPQLDDHLLAGITRVDD
PEAEPHKYASLHSLTMPNLPVHGKVKEKKKDRGKKRKQEGRKDDPEYLERKRLKKEKKRK
EKELTKILKDEAKASTSLESQRKNEQRGTKAETIRNDHKTILVEQGSRKDEAEPRQVVNG
AEAKATSSGLSGRNEDIGAKGASMQLKPEGSNGVKLNVDRGDASVNAAPPTSSHKFKIRI
KNRTLGKS
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggctcgcaaagggaagagcgaagaacagaaaggggataattctgaagcagtc
gttcgtcatcagaaactatgtctctcaattgacatggacaagcgtcgaatttacggttac
acagagcttgatgtagttgtaccagaaaatggaattttgggcttgcacgcggataatttg
gtgatagacagtgttacagttgatggggagcctacagaatttgaagttttcccgcactat
ttagcattggaaaatggggatagatggtgctctgtatcatcagttacttcagctgcagat
gctgctggttcagtttacttgtcacatctagatagagaattgctatcaaatttgctgatc
atgtgcaaaaaacccgcggagcatgatattgaaagacaggaaatgcatttagagaatgga
gtgaactcttcagctgaaaacaatcagaatgttaagaaggtccgtattgattattgggta
gagaaagctgaaactggaatccactttgatggtgatgttttacatactgacagccaaatt
cggcgtgcgcgatgttggtttccctgcatggatgacaatctacaatgttgctgctatgat
ttggaatttacagtggccagtaatcttgtggctgttagtactggaagcttactttatcag
atctggaccaaggatgttcctgcacgtaaaacttttgtctacagactaagtactcctgtt
aatgctagatggatatccttggcagtcgcaccatttgaaattcttcccgactccaatatt
actcatctctcacatatttgtctacctgctgacttaacaaagctgcggcacactgtagga
ttttttcacagtgcttttagctactatgaggactacctttctgcatcatttccatttggg
tcatacacacaagtttttattcctcctgagatagcaatatcctcagcgagtataggagcc
tccttgagcatcttcagctctcaattcctattcgatgggaaggtcattaataagaccata
gatacaaggattaaacttgcttatgcccttgcaagacaatggtttggagtgtatatcacc
ccagaagcgccaaatgatgattggttgttggatggtcttgctggtttcttgactgatatg
ttcatcaagagattccttggcaataatgaagcacgctataggagatacaaggctaatatt
gctgtttgcagagcagatgatagtggtgcaactgccttaagtgctgttgctgcttcaaag
aatttgtatggcacccagtgcattggtttatttggaaaaataagatcttggaagtctgtt
gcgattctccaaatgttagaaaaacagatgggacctgagtcatttcgcaagattcttcag
caaattgtttcccgggctcaagatgtaaatcgattgttgagaacccttagcacaaaagag
ttccggcaccttgccaacaaggttggtaatcttgagcgcccatttcttaaagaattcttt
ccacgttgggtcggatcatgtggctgtccggtgctgaagatgggattctcctataacaaa
agaaagaatatggtcgagttagcaatattgagggaatccacagctagattcgactcaagt
gatactatgagtaatggtaagcctgattcggaaaagcaagaaggtgatggatggcctggc
atgatgagcatacgggtgcatgagcttgatggcatgtatgaccatccaattctgcctatg
actggagaaccctggcagctgcttgaatttcagtgtcattctagacttgcagcaaaacgg
tttcaaaaaaccaaaaagagttctaaaccggatggttcagatgataatggtgacgctgtg
gctaatgtagatatgcgtgcaacctctgattccccattgctgtggctccgggcagatcct
gaattggagtatcttgctgaaattcatttaaatcaaccggtccagatgtggataaatcag
ttggagaaggacagagatgtagtcgctcaggtgcaggctatagcaacattagaagcattg
ccacatctttctttttcagttgttaatgctctcaacaacttccttggtgactctaaggcc
ttttggaggaatcgaatagaggcggcgtttgctttggccggtacagcatcagaggaaact
gattgggcaggcttgactcatcttgttgcattttataaaactcgaagatttgatgccaat
attggacttcccaagccaaatgacttccgtgatttccaggagtactttgtacttgaggct
attccacatgctatagctatggttcgagcagctgaccagaaaagccctagggaagctgtt
gaatttgttctacaacttctgaagtacaatgacaacagtggaaacccctactctgatgtc
ttttggcttgctgcgttagttcagtccattggtgagcttgaatttggacagcagagcatt
gtgtatttatcatcccttctcaagcgagttgatcggctcttgcaatttgacaggttgatg
ccaagttacaatggtattttgacaattagctgcatccggtctttgacccaaattgcacta
aagctgtcagagtttgttcctcttgatcgtgtcattgagctcattaatccattccgaact
tcgaagacactctggaaagttcgggttgaagcaagcagatcacttcttgatcttgaattc
cagcgcaatgggattgatgctgcattggcattgtttattagatatttggatgaagagcca
actttaagaggtcaagtgaagttaggcgtgcatgccatgcgtttatgtcagattagaaat
gaatctgattttgacagtgatgtgaagggtgaaattcttgtttctttattgcgcctgctg
gagagctcaatctcgtttaacaatgttattcttcgtcattacttgttctgcatcttacaa
gtcctcgctcgaagagcgccaacactgtatggagtgccaaaagatgaaactttgaggatg
gggcatgctgcattttgcagcaatcttaagaatattttcgctgatcttgtcaaacaatct
aaacctcctgaatgtcctctggagaaccttgaagatatacttgatgattcagccattgca
gatgctcttccgggcaatgaaaatgcaaaaggtgctactatctcagtacctgatagttta
tttgtatcagaggtccagaaagacacggaggatgctctattgagtaatgaaattgtaaac
actgctactggtgctatacctgatagtttggttgttacagaggtccagaatgagacagat
ttgctgaattataggcatggagtaatgcatccggtgggtgacctcccactggctagctct
gcggatccttgtagagaagaacctgtcttatctgacaatgagcaaacaaagccaatggtc
agcctgttgcatgagactggaggtatgtccatgggcccgccaacaaccgataaccttgga
agccgtgatcaagggcaaccagtaatcaatcttggacgagataatccaggaatttctgaa
cctatcagagaacctgatactgtttctgcaagttttgaaagaaagaagcctgttttcaag
attaaagtgagaaaaactgtcacatcttctcgagctgaggataatgaaaatgtaacgatg
gacaaatctcaagatgattttcgtgatgttgaccgtggggcaagtagctctgtttctgtt
gatgcacctcaaagaaatgttgttgaattattgagcagtggcggaaaccagttccctgag
gatgttaactcttgtcatgatgttggatctcatgttactgccagcattggaagtgccaaa
gttgcagttgaagttgaagagctaacaaaggagttgcaatgcactgctgagtcgagcaaa
gtttctttggtgccacaacttgatgatcacttattagcgggtatcacgagagttgatgac
cctgaggctgaaccacataaatatgcaagtttgcattcgctgactatgcctaaccttcca
gttcacggcaaagtgaaggaaaagaagaaagacagaggaaagaaacgaaagcaggagggc
cgcaaagatgacccagagtacttggagcggaaaaggttaaagaaggagaagaaaaggaag
gagaaggagttaacaaagattttgaaagacgaggcaaaggcttcaacgtccttggagagt
cagaggaagaatgagcagcgaggcaccaaagcagagacaatcaggaatgatcataagaca
attttagtagagcaaggaagtagaaaagatgaagctgaacccagacaagtggtgaatggt
gcagaagcaaaggcaacctcttcgggcttgtctggtagaaacgaggatatcggggctaaa
ggagcaagcatgcaattgaaacctgagggatctaatggggtgaagttaaacgtagataga
ggcgatgcgagtgtaaatgctgcgccacctacttcttcacataagttcaaaatcaggatt
aaaaaccgaacgcttggtaaatcatga
DBGET
integrated database retrieval system
