Solanum tuberosum (potato): 102578980
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Entry
102578980 CDS
T02981
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sot04131
]
102578980
04121 Ubiquitin system [BR:
sot04121
]
102578980
Enzymes [BR:
sot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102578980
Membrane trafficking [BR:
sot04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102578980
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102578980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Zf_IFT144_1st
Motif
Other DBs
NCBI-GeneID:
102578980
NCBI-ProteinID:
XP_006348224
LinkDB
All DBs
Position
Un
AA seq
395 aa
AA seq
DB search
MHLYRRICRICLFFPCFQLCNFAKSPYTFQTRKDSMDGRGASRYWCHHCSRRVNPMMEVE
LKCPICQLGFIEEMGSDTTETPLDSDSDSDRALSLWAPILLGMMTNPRRRSRLRHLEFED
DDDDDHTREADTQLDPDLASIINRRRRNSATILQLLQGIRAGMLAESENPNPDNENRETG
RESRDRERVILINPFNQTIIVQGSDNNSRNQPIGSLGDYFIGPGLDVLLQHLAENDPNRY
GTPPAQKEVVEALPVVTIDETLQCSVCLEDFEIGTEAKEMPCKHRFHGDCILPWLELHST
CPVCRHQLPSDESKVESAGTNDGSGSNTNAQSSNGNGRRYEDEDTRNENGRRFPVSLPWP
LSGLFSSPNSGSNGNSSSMTSSASNANSNAHMHED
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatatcgccggatctgcagaatttgtttgttttttccttgttttcagctgtgc
aattttgctaaatctccgtacacctttcaaacaaggaaggattcaatggacggaagagga
gcgtcaagatattggtgtcatcattgttcaaggagggtgaaccccatgatggaggttgag
ttaaaatgtcccatttgtcaactaggatttattgaagaaatgggatcagacactactgag
acccctttagattctgattctgattctgatcgtgccctctcactttgggcaccaatcttg
ttaggcatgatgaccaaccctcgtcgtcgttctagacttaggcatctcgaatttgaagat
gatgacgatgatgatcatacacgtgaagccgatacacaacttgatccagacctggcatct
ataataaataggcgcaggaggaactctgctacaattctccagctcttgcaaggtattcga
gctggaatgttggctgagtcggagaaccctaaccctgataatgaaaacagggagacaggt
agagagagtagggatcgtgagcgtgttatacttataaatccattcaatcaaaccatcatt
gtacagggttcggataataattccaggaaccaacctattggctcattgggtgattatttc
attggtcctggtttagacgtgttgctgcaacatttggcagagaatgatccaaataggtat
ggtactccaccagctcaaaaagaggttgtagaggcattgcctgtggtgacaattgatgag
acattgcagtgttctgtctgtttggaagactttgagattgggactgaagccaaagagatg
ccttgtaagcacaggtttcatggtgactgcatcttaccatggctggagcttcatagcaca
tgtccagtctgtaggcaccagttgccctctgatgaatccaaagttgaatctgctggaacc
aatgatggaagtggtagtaacacaaatgctcagagtagtaatggtaatggtagaaggtat
gaagatgaggatactaggaatgaaaacggtcgccggtttccagtgtcacttccgtggcct
ttgagtggcttgttttcatccccaaactcaggtagtaatggaaattcatcatcaatgacg
tcttctgcatcaaatgcgaactccaatgctcatatgcatgaggattaa
DBGET
integrated database retrieval system
