Solanum tuberosum (potato): 102579022
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Entry
102579022 CDS
T02981
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102579022
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102579022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box
F-box-like
LRR_At5g56370
LRR_RPS2
LRR_At1g61320_AtMIF1
F-box_5
DUF505
Motif
Other DBs
NCBI-GeneID:
102579022
NCBI-ProteinID:
XP_006338615
LinkDB
All DBs
Position
Un
AA seq
460 aa
AA seq
DB search
MNMDSILCDELLQEIFRRLPPPSAAAVSLVCKRWLHLLRSSTTSLSVCLIEPPFIPLFSS
FLSFHPFLSTVSVTITPTVDSSDQLLNSVASSCPNLRHLRFLNGPVSTLSLFSLSVSCPN
LVSLAVTLFRPLSFLWVPPFGCLKELSIYPAGNSGEFDYGDFYGSCELNLESLLLTGIKS
GDKGVGFLWRNCKKVTTLKLISCEEVGDQGSFLGFLQCLEGLQELELRTCRTIADGVLLK
LAENCDMLNSLLVYDGGSKEGLFHFLTQSKCGNLQNLDLRLPLDLDNNHLTAAAENLGSL
RSLRLQSCCLVTGEGLKILGNAMADGLEELALINCDVVERESGLLTTLGQDLKRLRKLDL
SFNDMLLDKELISMLVSCNSLNELKVRGCKKLTNLSMVSLTKCCKKLQSVDVMYCCGIEA
HGVELFVLNSPKLRLLQVEENKVSDVARTWASNKFIEVVP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggattcgattctctgtgatgaacttcttcaagaaatattccgccgccttcct
ccgccgtccgccgccgctgtttcattagtctgtaagcggtggcttcatcttcttcgctct
tcaactacttctctttctgtctgtttaattgaacccccttttatccctcttttctcctct
tttctcagttttcatccttttttgtctactgtttctgttaccattacacctacagtagat
tcgtccgatcaattgcttaattccgttgcttcttcttgccctaatctccgccatctccga
ttcttgaatggtcctgtttctactttatctctgttttctctttctgtttcttgccctaat
cttgtttctcttgctgtaactctttttagacccctttcttttctctgggtaccccctttt
gggtgtcttaaagaactctcaatttacccagctggaaattcaggggaatttgattatggt
gacttttatggttcttgtgagttgaatttggagagtcttttgttgactggaattaaatca
ggggataagggggttggttttttatggaggaattgcaaaaaggtgacaactttgaagctg
ataagctgtgaagaggttggtgatcaaggttcttttttaggatttcttcagtgtttagag
ggtcttcaagaattggaattgagaacttgtaggacaattgctgatggggttttgttgaaa
ttggctgagaattgtgacatgttgaactctttgttggtctatgatggtggtagtaaagag
gggttgtttcatttcttgacccaaagcaaatgtggtaatttgcagaatcttgatttaagg
ttgcctcttgatcttgacaacaatcatttgacagctgctgctgaaaatttagggagtttg
aggagtttgaggttacaaagttgttgtcttgttactggtgaggggctaaagattcttgga
aatgctatggctgatgggcttgaagaattggctttgataaattgtgatgtagtggaaaga
gaatcaggtttgttgactacattaggacaagatttgaaaagattaaggaaattagacttg
tcttttaatgacatgttacttgataaagaactgatatcaatgctagtatcttgcaacagt
ctgaatgaattgaaggtaaggggttgcaaaaagttgacaaatttatctatggtttcattg
actaagtgttgcaagaaattacaaagtgttgatgtaatgtattgttgtgggattgaggca
catggtgttgagttatttgtgttgaattcaccaaagttgagactgttacaggttgaggaa
aataaggtttctgatgtggctaggacatgggcatcaaataaattcattgaagttgttcct
tga
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