Solanum tuberosum (potato): 102579131
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Entry
102579131 CDS
T02981
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102579131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102579131
04121 Ubiquitin system [BR:
sot04121
]
102579131
03036 Chromosome and associated proteins [BR:
sot03036
]
102579131
03400 DNA repair and recombination proteins [BR:
sot03400
]
102579131
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102579131
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102579131
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102579131
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102579131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_2
zf-HC5HC2H
BRCT
zf-C3HC4_2
zf-C3HC4
zf-HC5HC2H_2
zf-RING_UBOX
zf-RING_2
zf-RING_6
zf-C3HC4_3
zf-C3HC4_4
RTT107_BRCT_5
zf-RING_5
PHD_NSD
zf-RING_10
PTCB-BRCT
zf-rbx1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
102579131
NCBI-ProteinID:
XP_006354984
UniProt:
M1A3A7
LinkDB
All DBs
Position
Un
AA seq
998 aa
AA seq
DB search
MADISHLERMGRELKCPICLSLLNSAVSLTCNHVFCNLCIQTGMKSGSNCPVCKVPFHRR
EIRPALHMDNLVSIYKNMEIASGVNMFLTQSNPSSKLPGEDTQSNGEKNCGFQETSKTVT
EAPATGNQKRKRGKGSKKSSGCNKKISGSNLIRPSFPTKKRVQVPQYPPSETPPPTKLVG
GNGKSITDEVQKPLVIERDRSMLYEKGEPVLSPFFWLREENIERSSQQTDGDIIMDTPPA
VPSFSDMKDLDDEVHCEMSPKSGPYDAASGADLFNSEMFDWTQRACSPELCSSPFKMKLK
DTIDSAGAQEKTQARSVEESGINASATENRTAVENEKGTDKGQLSSPALFPPENKTTSRK
DVVCKSSRSKALRISQKKQGKSIIGEVSEVHNASPKAAEKTMKNNQDNANAFISNKKDLK
NKKKGRSSRNVTGSVVEDISTLCGAKRLRKGNNSKSFNLSTLVNQEKHSEGSVETLDLKT
HNKLRKGSLSEQNKNCFGPKGGQKTAACNIPQTQDEALPFESANRLIPMDNRKPTPSTKL
KKCELGSGNKLHGKKKVKFSDNGQLADKDNITLQKIQKRVHNSLETEKSVLNLNDSVLQK
CEASQNQIQCAFCRSAEESEVSGVMVSYLNGNPVKEDVNGAPGVIHVHKYCAEWAPNVYF
GDDDVVNLESELKRSRRITCFFCGVKGAALGCYETSCRKSFHVPCAKLTPECRWDSDNFV
MLCPLHANSKLPCEIPGKQTKIGDSIKRNSRIHQPKVSATPDNAATLQWKSQKKNKNLVL
CCSALTADEKELVSTLKRLSGVTVVKNWDLSVTHVIASTDEKGACRRTLKYLMGVLAGKW
IMSIDWIIASLEATEFIDEQQYEIKIDTHGIVDGPKLGRLRILNKQPKLFNGYKFFFMGD
FLPSYKSYLHDLVIAAGGIVLNRKPIAVDQEILSPGCSPPFVIYSHEQLDQCEGSEKISI
IVRRRSDAEVLASSTGAVAASNSWILNCIAGSRLLELE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatttcgcatcttgaaagaatgggaagagagctcaaatgccccatctgcttg
agtctgttgaattctgctgtttcacttacatgtaatcatgtattttgcaatttatgtatt
cagactggtatgaaatctgggtccaattgtccggtgtgcaaagttccatttcatcgcaga
gaaatccgacctgctctccacatggataacttggtgagcatctataagaacatggaaatc
gcttcaggagtcaatatgtttctcactcaatccaatccttcatcaaaattgccaggggaa
gacactcaatctaatggcgaaaaaaattgtggattccaagagacatctaaaactgtaaca
gaagctccagcgacaggcaatcagaaaagaaaaagagggaaaggttcaaaaaaatcttca
gggtgcaacaaaaaaatttccggatcaaatcttattagaccttcttttccgacaaagaag
agagtgcaggtgccacaatatccaccttcagagactccaccacctacaaagttagttggt
ggaaatggtaaatccatcaccgatgaagttcagaaaccattggtaattgagagagacagg
tctatgctatatgaaaaaggagaacctgtactatctccattcttctggctgagagaagag
aatatagaaagatcaagtcagcaaacagatggggacattatcatggatacacctccagcc
gttccatccttcagcgatatgaaggacttggatgatgaggttcactgcgaaatgtctcca
aaaagtggaccctatgatgcagcaagtggagcagatctttttaacagtgagatgtttgac
tggacacaaagagcttgctcccctgaactttgttctagcccctttaagatgaagcttaag
gatactattgattctgctggagctcaggaaaagactcaagctcgctcagttgaggaaagt
ggtattaatgcatcagcaactgaaaacagaacagctgtggaaaatgaaaagggtactgat
aaaggacagctgagttcacccgctttatttcctcctgaaaataaaaccactagtagaaaa
gacgttgtttgcaagtctagcaggagtaaggcattgagaattagccagaagaaacaagga
aaaagcataattggagaagtatcagaagttcataatgcttcaccaaaagcagctgaaaaa
actatgaagaacaatcaggataatgccaatgcatttatctcgaataagaaggatttgaaa
aacaagaaaaagggtagatcctctagaaatgtcactgggtcagtagtagaagacatttcc
actttatgtggtgctaaaagacttcgcaagggcaataactcgaagtccttcaacttgtct
actcttgtgaatcaggaaaaacacagtgaaggaagtgttgagacacttgacttgaagaca
cataataaactccgcaagggatcattaagtgaacaaaataaaaactgttttggaccaaaa
ggcggacaaaaaactgctgcatgtaacattccacaaactcaagatgaagctttgcctttc
gaatcagcaaatagattgattcccatggataacaggaaacctactcctagtacaaaactg
aagaaatgtgagctcggtagtggcaacaagcttcatgggaagaaaaaagtgaagttttct
gacaatgggcagcttgctgacaaggataatattacgcttcaaaagattcagaagagagtg
cacaattcattggaaacagagaaatctgttttgaacttgaatgattcagttttgcagaag
tgtgaggcaagccaaaaccaaatacagtgtgctttctgccgttcagcagaggaatctgag
gtttcaggagtcatggtaagctaccttaatggaaaccctgtcaaagaagatgtcaatgga
gcaccgggtgttatacatgttcacaaatattgtgcagagtgggcccctaatgtatatttt
ggagacgatgatgtggtcaaccttgaatctgaactgaagaggagtcgaaggatcacttgt
tttttctgtggagtaaagggggcagctcttgggtgttatgagacgagttgtcgcaaaagc
tttcatgttccttgtgccaaattgacaccagagtgtagatgggattctgacaactttgtt
atgttatgccctttgcatgctaactctaagttgccatgcgagatcccaggaaaacagaca
aagattggagatagtattaaaagaaattctcgtatccaccaacccaaagtctcagcaaca
cctgataatgctgctactttgcagtggaagtctcagaagaagaataagaacttagtgctc
tgttgttcagctctaaccgctgatgaaaaagagcttgtttctacattaaagaggttgtct
ggagtgacagtagtcaagaactgggacctaagtgtcacccatgtcattgcttctacagat
gagaaaggagcatgccgaagaactctcaaatatttgatgggtgtcttggctgggaaatgg
ataatgagcatcgactggattattgctagcttggaagccacagaatttattgatgagcaa
caatatgagattaaaatagatactcatggcattgtggatgggcctaagcttggaagattg
aggattttaaacaagcaaccaaagcttttcaatggatacaagttcttttttatgggtgac
tttttaccttcatacaagagctacctacatgaccttgttattgctgctggaggaattgtc
cttaacaggaagcctatagcagtggatcaggaaattctttcacccggatgctctccaccg
tttgtaatttatagtcacgaacaacttgatcagtgtgaaggaagtgaaaaaatttcaatt
atagtgcgcagaagatctgatgcagaagttttggctagttcaactggagctgtagctgcc
agcaactcatggattctaaactgcattgctggctctaggttgttggagctagaatag
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