Solanum tuberosum (potato): 102579138
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Entry
102579138 CDS
T02981
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102579138
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102579138
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102579138
NCBI-ProteinID:
XP_006357121
UniProt:
M1A9L7
LinkDB
All DBs
Position
Un
AA seq
397 aa
AA seq
DB search
MEMSKTRTNVALVVLLVTCLTVGATVAADNSTRRHLAKKYKGPCMATNLIDKCWRCDPHW
ADHREKYADCAMGFGSKAIGGKGGRVYVVTDNSDKDVENPTPGTLRHAVIQKEPLWIIFE
RHMHIKLKRELLMQSHKTIDGRGFNIHIEKGAGLKMQSVNNIIITNLHVHNIGITPGGMI
RDSVDHVGIRSEDEGDGISLFAATDVWIDHVSMSRATDGLIDAVQGSTGITISNCHFTDH
DKAMLFGANDNHVEDKKMQITLAYNHFGKRLDQRMPRVRFGFFHIVNNDYTHWMRYAIGG
NSGATIISQGNRFIAQASLLIKEVTHREKAEESEWKNWTWLSIDDDMQNGAFFRTSGDQD
ALRKLKNLNLIPAEPSYKVGILTKFAGSLSCTAGRPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtcgaaaacaagaaccaatgtggctcttgttgtgttgttggtaacttgtttg
actgtaggggcaacagttgcagcagacaacagcacaagaaggcacttggccaaaaaatac
aaaggaccatgtatggccactaatcttattgacaaatgctggagatgcgaccctcattgg
gctgatcatcgcgaaaaatatgctgattgtgcaatgggcttcggcagcaaggccattggt
ggtaaaggtggacgtgtttacgttgtcacagataattctgacaaggacgttgagaatcct
acacctggtacccttaggcacgcggtgatccaaaaggaacccttgtggatcatattcgaa
agacatatgcatattaagctaaagagggaactactgatgcaaagccacaaaacaatcgat
gggcgtggattcaacattcatatcgaaaaaggagctggacttaagatgcaaagtgtgaac
aacattataatcactaatcttcacgttcacaacattggaataactcctgggggtatgatc
agggattcagtagaccatgttggcataagaagtgaggatgaaggtgatggcatcagtctc
ttcgcggcaaccgatgtctggattgaccacgtatccatgtcacgcgccacggatgggctc
attgatgccgtccaaggatcaaccggtatcaccatctccaactgtcatttcaccgatcac
gataaagcaatgttgtttggtgctaatgataatcacgtcgaagacaagaaaatgcaaatt
accttggcctataaccatttcggtaaaagattagatcaaaggatgcctagggtcagattc
ggattcttccatattgtcaacaatgattacacccattggatgaggtacgctattggtgga
aacagtggagcaacaattattagtcaaggtaatcgttttatcgcacaagcgagtcttttg
attaaagaagtgacacatagggaaaaagcagaagaatcagaatggaagaattggacttgg
ctatccatagatgacgatatgcaaaatggtgctttttttagaacatctggtgatcaagat
gcactaagaaaattaaagaatttaaatttgataccagcagagccatcatacaaagttgga
attcttacaaagtttgcaggatcactttcttgcaccgcaggacgtccgtgctag
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