Solanum tuberosum (potato): 102579317
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Entry
102579317 CDS
T02981
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102579317
Spliceosome [BR:
sot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102579317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
102579317
NCBI-ProteinID:
XP_006349130
LinkDB
All DBs
Position
Un
AA seq
813 aa
AA seq
DB search
YFPYPILHVHRPPPSLLPTPPPPRRPPASPPGGRRHHRHHLLPSSSFFLPLKPLSLSPSI
SLYTPYSSSSTSPQQLLLDSQETQVDFDNWDPISASGVAESFNFDDSFDSVELKKFETPA
VEVRELEDIPDQWRRARLAWLCKELPAHKTPTMVRILNAQRKWIRQEDGTFVAVHCMRIR
ENEAAFRVYKWMMQQHWFRFDFALATKLADYLGKERKHLKCREIFDDIINQGRVPCESTF
HILIIAYLSSSGPSVLDEACNIYNRMVHLGGYKPRLNLHKSLFKALLGKASSESKHFLKQ
AEFIYQNLTSSGLEIHRDIFGGLIWLHSYQDVVDMERIAALRAEMRSRGIKESKEVLVSV
LRACSKDGNVEEAERTWSKLLSIDGSPPSQAFVYRMEVYAKIGEPTKSLKVFRRMQEQLG
STSVAAYHKIIKVLSKHQKLDLADSIMSEFINSGMKQLVPSFIDLMRMYSVAGLHEKLES
TFLRYREVCHPNLTVFNIYLDSLVNTGNLSLAEEIFHEMRGNVAIGVDSRSCNSILRGYM
TSGEYVKAVKIYNLIRQKKYDVEIESSLMERLDYVLSLREKVVEEPVRLKLTPEKREVLT
GLLLGGVQIRSDGERRLHAIHYEFNEESRIHSIFKKHIHDEFHEWLGSHDMMVDSTADIP
NSFTTISHSYFTFYADQFWPNGRPCIPKLIHRWLSPRVLAYWYMYGGYRTSSGDILLRVK
GSSEGVVSILKALKAKSLNCRVKKRGRVFWIGFLGDNATFFWKVVEPFILDELKELLKAG
GDSNGSLETQCINFDSGSETDEKNSERHRALSD
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
tacttcccttatccaatccttcatgtccaccgtcctccgccctctctcctccccactccg
ccaccaccacggcggccgccggcctcaccccccggcggccgccggcatcatcgccaccac
ctcttaccttcatcatcctttttccttcccctaaaacccctttcactgtctccctcaata
tccctttacaccccctattcttcatcttccacttcaccccaacaacttctgctggattcc
caagaaacccaagttgatttcgacaattgggaccccatttctgcttctggggttgctgaa
agtttcaattttgacgattcttttgattctgtggagttgaagaagtttgaaaccccagct
gttgaggtgagggaattagaggatattcctgatcaatggcgtagggcaagattagcttgg
ctttgtaaagagcttcctgctcataagacgcctactatggttaggattttgaatgcacaa
aggaagtggattaggcaagaagatgggacttttgttgctgttcattgtatgcgaattcgc
gaaaatgaagctgcttttagggtttacaaatggatgatgcagcaacattggtttcgattt
gatttcgctctagctacaaagctagcagattatttggggaaggaacgaaagcacttgaag
tgccgggagatttttgatgacataattaatcagggacgagtgccatgtgaatctacattc
catattctcattattgcctatcttagttcatctggaccatcagtgttagatgaagcctgt
aacatctacaatcgcatggtgcacttgggaggttataagcctcggcttaacttacacaaa
tctctgtttaaagctcttttggggaaggcatcgagcgagagtaaacactttctgaaacag
gctgaatttatatatcagaacttgacttcctctggattggaaatacacagagatattttc
ggcggtcttatatggcttcacagttatcaagatgtggttgatatggaaagaattgctgca
ctaagagcagaaatgcggtcaagaggaattaaagagagcaaagaggtacttgtgtcagtt
ttaagagcttgctcgaaggatgggaatgtggaggaagccgaaagaacttggtcaaaactt
ctctccatcgatggcagtcctccttctcaagcttttgtctatcgtatggaagtgtatgca
aagattggagaacctacaaaatctttgaaagtatttcggaggatgcaggaacaattgggt
tccacctccgttgcagcataccataaaataataaaggtgttgtctaaacatcaaaaacta
gaccttgcagattctatcatgtccgagttcataaacagtggtatgaaacagctggtccca
tcattcatcgatttgatgaggatgtactccgttgcaggtttacatgagaaactggaatct
acctttctccggtaccgtgaagtctgccatccgaatctgacagtttttaacatttatttg
gattcgttggtgaatactggcaatctgagcctggctgaagaaatcttccatgaaatgcgt
ggtaatgtggcaattggtgttgattctcgttcttgcaacagtattttgagaggctatatg
acctctggagagtatgtgaaggcagtaaagatatacaatttgattcgccaaaagaaatac
gacgttgagattgaatcttcgttgatggaaagacttgattatgttcttagcttgcgggag
aaagtagttgaagaacctgtaaggctgaagctcacaccagaaaaacgagaggttttgacg
gggttgcttcttgggggtgtgcaaattagatcagatggagagagaagattgcatgcaatc
cattatgaatttaacgaagagtcgaggatccattccatttttaagaaacacatacatgat
gaatttcacgagtggttaggctctcatgatatgatggtggatagcactgctgacattcct
aattcttttaccaccatttcacattcttattttactttctatgctgatcagttctggccc
aatggacgtccttgtataccaaaactcatacatagatggttgtcacctcgcgttcttgct
tattggtatatgtatggtggttaccggacatcatctggtgatattctattgagagtaaag
ggaagttcagagggtgttgtgagtattcttaaagcactgaaagccaaatcattaaactgc
cgagtaaaaaagagggggagggtcttttggataggatttctgggggacaatgctacattc
ttctggaaggtggtagagcccttcattcttgatgaattaaaggaactccttaaagcaggt
ggcgactcaaatggatccctggaaacccaatgtatcaattttgacagtggctcggagact
gacgagaagaattcagagcgtcatagagccttgtctgattga
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