Solanum tuberosum (potato): 102579328
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Entry
102579328 CDS
T02981
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sot01009
]
102579328
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sot04131
]
102579328
Protein phosphatases and associated proteins [BR:
sot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102579328
Membrane trafficking [BR:
sot04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
102579328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
102579328
NCBI-ProteinID:
XP_015166653
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All DBs
Position
Un
AA seq
998 aa
AA seq
DB search
MDSQPSRSLGRFESNPSTINNTPFLTKSISDASSSSPHSQSLASILNNPHAGKSDGFWWW
STSSSIPTPDFLPLSTLPKPGSETRVPDFQSYLSSISDPYARFHDIQQHARFESLEDQDD
QNALVACLKEVPALYFKEDFELEDGATFKAACPFRTTAENLVTQEKLSQYLDVVELHLVR
EISLRSNSFFEAQGQLEDLNSKIVVGCDRIRELKETIKLLDDNLVGSARKVQELNVQRSE
LISHQDKLNLILYVNQALSTLKLLVASADCAGALDVIDDLQHLLDGDELAGLHCFRHVRD
QLAASIDSINSILSAEFMRISIHGAGNVDALSTSKFKVQTTISMNGEGHEVKLDEEDTYN
LRDRLLPFVIGLLRTAKLPAVLRIYRDTLTADMKTAIKMAVEELLRVLGAQPMDSDFVAG
ERAVDADGGSSSLASRLRSLSPECFVHLLKAVFLIVQAHLAQASEVKRAIEWILCHLDGH
YAADSVAAAIALGAAASETAHETTDQVNSSLQLSVQRNSAKVSSSHGNGNDGITSSTLSR
NFRADVLRENAEAVFAACDAAHGRWAKILGVRSPIHPRLRLQEFLNIYNITQEFITATEK
IGGRLSYSIRGTLQSQAKAFIDFQHESRMAKMRAILDQENWAEIDVPDEFQAIVTSLFCS
ESETRELADEVSADIAPSSPEMVLGSDGSPTAEARLQKISQNAEHTDSIPRLESTAQSNE
TNSRERGKSSTRLLFFRGVGYHMVNCGLILVKMLSECIEMNNSLPGLSSEVIHRVVEILK
LFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFTYSIIPELKRILLLKVPETRKG
LLIMEVDRVAQDYMVHRDEIHSKLVQIMRERLLVHLRGLSQIVESWNRPENTDTQPSQFA
RSITKEVGLLQRVLSRTLHELDVQAIFRQVVIIFHSQISEAFSHLDISSPHAKKRMYCDV
QHILACIRSLPSDSKSNPPNWGQLDEFVAKNFGEEVGQ
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggattctcagccttcccgttctttgggaaggtttgaaagtaatccttctactatcaac
aatactccattcttgaccaaatcaatttccgatgccagtagcagcagccctcatagccaa
agcttagcctccattctcaacaacccacatgcgggaaaatccgatgggttctggtggtgg
tccacttcatcatctatcccgacacccgacttcctacctctatcaactctacccaaaccc
ggatccgaaacccgggtccctgatttccaatcctatctctcttccatctccgacccatat
gctcgtttccacgacattcaacagcacgcgaggtttgagtcactggaagatcaagacgac
caaaatgccctcgttgcttgcttgaaggaagtccctgcgctatacttcaaagaggatttt
gagttagaggatggtgctacttttaaagctgcctgcccatttaggaccactgcggaaaat
ttggttacacaggagaagctatcacagtatttggatgtagtggaattgcacttggttagg
gagatttccttgagatcaaattccttttttgaggcacaaggtcagttagaggatttaaat
tcgaagattgttgtggggtgtgataggataagggaattaaaggagactataaagctcttg
gatgacaatttggtggggtctgctagaaaggtacaagagttgaatgttcagaggagtgaa
ttgatttcgcaccaggacaagttgaaccttatactttatgttaatcaagctctttcaact
ctcaagttgcttgttgcatctgcagattgtgccggagctttagatgttatagatgattta
caacatttattggatggagatgaattagctggtctacattgtttccgccatgttcgtgac
cagttagccgcttcaattgattccattaacagcattctttcagcagaatttatgcgtata
tctatacacggagctggcaacgtggatgctctaagtacatcaaaatttaaagtgcagacg
acaatttccatgaatggagaaggccatgaagttaaattagatgaagaagacacttataat
ttgcgagaccggctacttccttttgttattgggttgcttagaaccgcaaaactccctgct
gtattgagaatataccgtgacactcttacggctgatatgaaaactgccattaagatggca
gttgaagaactgctacgggtgcttggtgcccaacctatggattcagattttgttgcagga
gaacgagcagttgatgctgatggtggaagctcatcccttgccagtagattgagaagcttg
tcgcctgaatgttttgttcatcttttgaaggctgttttcctgatagtgcaggcacactta
gcacaggcatctgaagttaaaagagccattgagtggattttgtgccatcttgatggccat
tatgccgctgactcagttgctgctgcaattgcacttggagcagcggcttcagaaacagct
catgaaaccaccgatcaggtaaattcctcgctgcaactttctgtgcaaaggaactctgcc
aaggtctcttcttctcacgggaatggaaatgatggtataacgtcatcgactttatcgaga
aatttcagagctgatgtattgagagagaatgcagaagccgtttttgcagcttgtgatgct
gctcatggcagatgggcaaagatccttggagtgcgttctcctatccaccctagactgagg
ttacaggagtttctaaatatatataacatcactcaagaatttataacggctactgagaag
attggtggaagattgagttatagtattcggggaacattgcagtcacaggccaaggctttt
attgatttccaacacgaatccaggatggcaaagatgagggccattcttgaccaggaaaat
tgggctgagattgatgtccctgatgagttccaggcaattgtcacatcactgttctgctca
gaatctgagacccgtgaacttgctgatgaggtttcagctgatattgcaccaagcagccct
gagatggtcctgggcagtgatggttcccctacggcagaagctagacttcaaaagatatca
caaaatgcagagcacactgattctattccacgtttagagagtacagcacagagcaatgaa
actaactcaagagagcgtggaaaatcttctactagacttcttttcttcagaggtgttggg
tatcatatggttaactgcggcttgattttggtaaagatgttgtcagagtgtattgagatg
aataatagcttgccgggcctatcttcagaagtcattcaccgtgttgtcgaaatcctgaaa
ttgttcaatacaaggacttgtcagcttgtccttggtgctggagcaatgcaggtttcaggt
ttgaagtctattacttctaaacacttggccttggcaagtcaagtcatcagtttcacatac
agcataattcccgaactcaagaggattctgttacttaaagtgcctgagacgcgcaaagga
ctgctgattatggaggttgatcgtgtagcacaggactatatggtgcaccgagatgagata
cactcaaagttggtgcaaataatgagggaaaggttgctggtccacctccgtgggctgtca
cagattgttgagagttggaataggccagaaaatactgatacacagccaagtcagtttgct
cgttctatcactaaggaagttggccttcttcaacgtgtcttatctagaaccctgcatgag
ttagatgttcaagctattttcaggcaagtggttattatcttccattctcaaatttcagaa
gcgttttcgcacttggatatcagcagtccacatgctaaaaaaagaatgtattgcgatgtt
cagcatattcttgcatgtatcagatcattgccttcagatagcaaatctaatcctcctaat
tggggacagcttgatgaatttgtggcaaaaaattttggtgaggaagttggtcaatag
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