Solanum tuberosum (potato): 102579401
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Entry
102579401 CDS
T02981
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102579401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sot04040
]
102579401
Ion channels [BR:
sot04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102579401
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Ion_trans_2
Babuvirus_MP
Motif
Other DBs
NCBI-GeneID:
102579401
NCBI-ProteinID:
XP_006364384
LinkDB
All DBs
Position
Un
AA seq
771 aa
AA seq
DB search
MDTFEKDEMPMLSPSYPQSDGNDAFQNRRSTYRTRSASLSMPMSSMDSFENDSSYVGYTG
PLRSERRTSLVQMSGPLYIGRDPENSSRPTPAAVVHKPTLPTTEKYPSISSAERNDWRNN
DYTGKNEHLFKSGQLGMCNDPYCTTCPTYYHLKARQNNSKSSDIFDHKFHNVLYGDAKGW
AKRTCSFLHPYIPGVMNPHAKIVQKWNKFFVISCLSAVFIDPLFFFLLCVQKGNKCIILN
WPLTTTIVILRSITDIIYLMHILLQFRLAYVAPESRVVGAGDLVDHPKKIAINYLSGYFV
VDFFIVLPLPQIIVLLILPKSIASSGANYAKNLLRVAILLQYIPRLCRFLPLIAGQSPSG
FVFESAWANFFINLLTFVLSSHVVGSCWYLFGLQRVNQCLRDACHESKIARCVEFIDCGY
GNDYRNFRRDPTWDQWKNNSDAVACFTNGGFDYGIYEQAVNLTTEGSVVTRYVYSLFWGF
QQISTLAGNQVPSYFEWEVLFTMAIIGMGLLFFALLIGNMQNFLQSLDRRRLEMSLRRRD
VEQWMSHRRLPVELRRQVQEAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFKFIKKV
RIFALLDEPIIDAICERLRQKTYIAGSKVLYRGGLVDKMVFIIRGKMESIGEDGNVASLS
EGDACGEELLTWCLEHSSINRDGKKVRIPGHRLLSNRLVRCLTNVEAFTLRASDLEEVTN
LFARFLRSPRVQGALRYESPYWRGLAARRIQVAWRYRKKRQSRTDSSSPQH
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggacacttttgaaaaagatgagatgccgatgttatcaccatcatatccacagtctgat
ggaaatgacgcctttcaaaatcgacgttctacgtacaggacaaggagtgcatccctgtca
atgccaatgagctctatggattcatttgaaaatgatagtagttatgtaggctatactggt
cctttgagaagtgagaggcgaacttcattggttcaaatgagtgggccattatatattggt
cgcgatcctgagaatagctctcggcccactcccgctgcagtagtgcataaaccaactctg
cctacaacagaaaaatatccttcaattagcagtgcagaacgaaatgattggcgtaataat
gactacactgggaaaaatgaacatctctttaagtctggacaactgggcatgtgcaacgat
ccgtattgcacaacatgtccaacctattaccatttaaaagcacggcaaaataattcgaag
tcttcagatatatttgatcacaagttccataatgtgctgtatggagatgccaaaggatgg
gcgaagagaacttgttctttcttgcatccatatattcctggcgtcatgaatcctcatgcg
aagattgtccagaagtggaacaaattttttgtcatctcatgcctatctgctgtatttatt
gatcccctgttcttctttttgctttgtgtccaaaaggggaacaaatgcataatactaaat
tggcccctcacaacaactattgtgattttgaggagcatcaccgatatcatctacttaatg
cacatccttcttcagttccgattagcttatgttgcccctgaatctagggtggtgggagca
ggtgacctggttgaccaccctaaaaagattgctataaactatctctcgggatactttgtt
gttgacttctttatcgtattaccacttcctcagatcatcgtattgctgattttacccaag
tctattgcatcatctggggcaaattacgcgaagaatctactgagggttgctatactactc
cagtacattcccaggttgtgcaggtttttgcctttgatagctggccagtctccaagtggt
tttgtatttgagtctgcatgggcaaattttttcataaatcttctcacttttgttttatca
agccatgtggtgggctcatgctggtatctttttggtttacagagggtgaatcaatgtctt
cgagatgcttgtcatgaatcaaagatagcgaggtgtgtggaattcatagactgtggttat
ggcaacgactacagaaattttaggagggatccaacatgggatcagtggaagaacaattct
gatgcagttgcttgttttactaatggaggttttgactatggaatctatgaacaagctgtt
aacctaaccactgaagggagtgttgtcacaagatatgtgtactcattgttttggggattc
cagcaaattagtacactagctggcaatcaagtcccaagttattttgagtgggaagttttg
ttcacaatggctatcatcggaatgggactcctgttttttgccctcctgattggaaacatg
caaaactttctgcagtctctagatcgcaggaggttagaaatgtctctgagacgtcgtgat
gttgaacaatggatgagccataggcgcttgccagtagaactgagaaggcaagttcaagag
gcagagagatataactgggcagctacccgaggggtcaatgaagaaatgctactagagaat
cttcctgaagaccttcaaagagatataaggagacatctttttaaattcatcaaaaaggtt
cgaatatttgcacttctagatgaacctattatagatgccatctgtgagagattgagacag
aaaacatacatagcaggaagcaaagttttataccgtggtggtctagttgacaagatggtt
ttcataattcggggtaagatggaaagcattggagaagatggaaatgtggcctccttgtct
gaaggggatgcctgtggggaagaactcctcacatggtgccttgagcattcttctataaac
agagatgggaaaaaggtcagaattccaggacacagattgctgagcaacagactagtcagg
tgcctcacaaatgttgaagcatttacattacgagcttcagatcttgaagaagtcacaaat
cttttcgcaagattcttgaggagtccacgtgtccaaggtgccctaaggtatgaatctcca
tattggcgagggctggcagcaaggcggatacaagttgcctggagatacaggaagaaacgt
caaagccgaacagactcttccagcccccaacactaa
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