Solanum tuberosum (potato): 102579934
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Entry
102579934 CDS
T02981
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102579934
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102579934
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
A1_Propeptide
Motif
Other DBs
NCBI-GeneID:
102579934
NCBI-ProteinID:
XP_006363934
UniProt:
M0ZJT8
LinkDB
All DBs
Position
Un
AA seq
439 aa
AA seq
DB search
MAFISGNSILLILFIWLASLVPHIHARIAEFDAYLEKQALEDLNSSLEAYTHNPEEVTNA
FNKEVGNALLKYKSLRRNLKEKNKCMATNPIDRCWRCDKNWAENRMDLEECARGFGHKTT
GGKNGKYYVVTDESDDNVQEPKPGTLRHAVIQEEPLWIIFEKSMVIKLQQELMITSDKTI
DGRGVAVHIANGAGLTIQFVHNVIIHNIRIQNIISTNGGMIRDSVNHIGLRTVSDGDGIS
IFGSNHIWIDHCTLSECTDGLVDAIMASTAITISNCKFNHHNDVMLLGATDAFPQDSIMQ
VTVAFNRFGEGLIQRMPRCRWGFFHVVNNDYTHWQMYAIGGSAHPTIISQGNRFKAADNP
NTKQVTKRDYAPESEWKKWQWVSEGDSFLNGAYFVESGPQDKKKTALTKNHKIKFKPGSH
AGRLTRFAGVLKCKPGIPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcctttattagtgggaattcaattttgttaatattgttcatatggttagcttcatta
gtcccacatatacatgccagaattgctgaatttgatgcatatttggaaaaacaagctttg
gaagacctcaactcttcacttgaagcatatacacataatcctgaggaagtaactaatgca
ttcaacaaagaagttggaaatgcattgctgaagtataaaagcttaaggaggaatcttaaa
gaaaaaaataaatgcatggcaaccaatccaattgacagatgctggaggtgtgacaaaaat
tgggctgaaaacaggatggatttggaagagtgtgctagaggatttggccacaaaacgacc
ggtggtaagaatggcaagtactatgttgtcaccgatgagtcagatgataacgtgcaggaa
ccaaaaccggggacccttcgtcatgctgtgattcaagaggagccattgtggatcatcttt
gagaaatcaatggtgatcaagttgcaacaagaacttatgatcacgagtgacaagacaatc
gatggcaggggagttgctgttcacatagccaatggtgctggattaacgatccaattcgtg
cataatgtcataatccacaacatcaggattcagaatatcatatctactaatgggggcatg
ataagagattctgttaaccatattggtctaaggacagtgagcgatggcgatggcatttcc
atttttggttccaatcatatctggattgatcattgcactttgtcagaatgtaccgatggc
cttgttgatgccatcatggcttccactgctatcaccatttctaattgcaaattcaaccat
cataacgacgtgatgcttttgggggcaactgatgcctttcctcaagattcaataatgcaa
gtcacagtagcattcaatcggttcggggagggattgattcagaggatgccaaggtgcaga
tggggattcttccatgttgtcaacaatgactacactcattggcaaatgtacgcgattggt
ggcagcgctcatccaaccattatcagccagggtaatcgtttcaaggctgccgataatcct
aatactaagcaggtgactaagagggattacgcaccagaatccgagtggaagaagtggcaa
tgggtatcagagggcgattcgttcttaaatggagcttattttgtggagtcaggaccacaa
gacaagaaaaaaactgcattgacaaaaaatcataagatcaagttcaagcctggttcacat
gcaggacggctcactcgctttgctggcgtgctcaagtgcaaacccggcataccttgttag
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