Solanum tuberosum (potato): 102580048
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Entry
102580048 CDS
T02981
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03030
DNA replication
sot03420
Nucleotide excision repair
sot03430
Mismatch repair
sot03440
Homologous recombination
sot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102580048
03420 Nucleotide excision repair
102580048
03430 Mismatch repair
102580048
03440 Homologous recombination
102580048
03460 Fanconi anemia pathway
102580048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sot03000
]
102580048
03032 DNA replication proteins [BR:
sot03032
]
102580048
03400 DNA repair and recombination proteins [BR:
sot03400
]
102580048
Transcription factors [BR:
sot03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102580048
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102580048
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102580048
MMR (mismatch excision repair)
102580048
DSBR (double strand breaks repair)
HR (homologous recombination)
102580048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
DUF223
DUF936
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
102580048
NCBI-ProteinID:
XP_006364465
UniProt:
M1D1K1
LinkDB
All DBs
Position
Un
AA seq
905 aa
AA seq
DB search
MPPINLTEGAIEMLSIGEGHPEEFKPVLQITDVRLVNTQNQTNNNERYRILISDGTHIQQ
GMLATQKNDLIRSQQIRKGTIIQMKEFVRNVIQNRVIIIIIELDILLETCDQIGDPKHYV
RTDGSVPSVPRPAAPLQPSTNQLGGVSVNPQSIASLSATSGSTPRPNMSGGMQSPEMNRS
SVYNTASVGNTDSGRYSSGAPLYPRAESGPAISRAPMNYVRPPQPSYQQPPQSSYQQPSP
MYSNRGPVAKNEAPPRIIPIAALNPYQGRWTIKARVTAKTELRHYNNQRGDGKVFSFDLL
DSDGGEIRVTCFNSVADQFYDQIEPGRVYQISKGSLKPAQKNYNHLPNDHEIMLESTSVV
QPCFEDDRAIPQQQFHFRPISDIEAMENNNVIDVIGVVSSISPSSSIMRKNGTETQKRVL
QLKDMSGRSVEVTLWGNFCNAEGQTLQSLCDSGAFPVLAVKAGRVNDFNGKSIGTISTSK
LFIEPDFPEALKTKAWFEREGKNMPSMSLSREVSSIGRTDVRKTISQIKDEKLGTSEKPD
WITVSASVTFIKVDNFCYTACPLMIGDRQCNKKVTNNGDGKWRCDRCDQTVDECEYRYIL
RFQIQDHTGLTWVTAFQECGDQIMGVSAKELYFLKYEEQDDDRFAEIMRNVLFNQFIFKL
KVKEEMYSDEQHVKSTVVKAEKLNFQPETRFLFDLINKINGQESSTLPPKTDDATLNSGF
NNTGFGNKRKEPMSPVASYGVSHSGISRDSGLQGNRQGPYGNQLTGSQFAPPGSTAGSIS
RESGLQGNRQGPYGNQPTGTQNAPTGSSTGMYMSCNSCGGTGHSASNCPSMMSGQSQAYG
GGFGNRATSGMSSGGGGGGGGGECYKCHQYGHWARDCPGVSNAPAANNMTSGRYGNTPRQ
HVGGF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgattaacttgacggaaggagcaatagagatgctatcgatcggagaagggcat
cccgaggagtttaaaccggtgctacagatcacggatgttcggttggtgaatactcagaac
cagacaaacaataatgaacgataccggattttgatatcggacggaacgcatattcagcaa
gggatgttagctacgcagaagaacgatctaattcggtctcaacagattcggaaaggaact
attattcagatgaaagagttcgttcgtaatgtcatccagaatcgagtgatcatcattatt
attgaattagatattttacttgagacgtgtgatcaaattggagacccaaagcattatgtc
agaactgatggtagtgtcccttcggtgccacgaccagctgccccgctgcagccttccacc
aatcaattaggtggtgtaagtgtaaacccccaatcaattgcttctctttccgctacttca
ggctcaactccaagaccaaatatgtcaggaggaatgcaatctccagagatgaaccgtagc
agtgtttacaatactgcctctgttgggaatactgactctggacgatatagttcaggtgca
cctctttaccccagagcagaatctggtcctgcaatttcacgggctccaatgaattatgtg
cgtccacctcagccttcttatcaacagcctcctcagtcttcttatcagcagccatcacca
atgtactccaacagaggacctgtagccaagaatgaagcacctccaaggattattccaatt
gctgctctcaatccatatcagggtcggtggactatcaaggccagggtaactgcaaagacg
gaactcagacactacaacaatcaaaggggtgatggaaaagtattctcttttgatcttctt
gattccgatggaggagaaataagggtgacttgttttaactctgtagctgaccaattttat
gaccagattgaaccaggtagagtgtatcaaatttcaaaaggaagcttgaaaccagctcag
aaaaattacaatcaccttccaaatgaccatgaaattatgctcgagagcacgtctgtagtt
caaccttgttttgaggatgacagggctattcctcagcagcaatttcattttcggccaatc
agtgacattgaagccatggagaacaacaatgtgatagatgtcattggtgtggtgtcttca
ataagtccatctagttcaataatgaggaaaaatggtacagaaactcagaagagagtcctc
cagctgaaggacatgtctggtagaagtgttgaagtaactttgtggggaaatttctgcaat
gcagaaggtcaaacacttcagagtctctgtgattctggggctttccctgtcttggcagtt
aaagctggtagagtaaatgattttaatggcaaatctataggtactatatctacaagcaag
ttgtttatagaaccagattttcctgaagctctgaaaacgaaggcatggttcgaaagggag
ggaaagaacatgccatctatgtcattgtcacgagaagtgagcagtattggtcggacagat
gtgcggaagactatatctcaaatcaaagatgagaagttaggcacttctgagaaaccagat
tggatcactgtaagtgccagtgttacatttataaaggttgacaatttttgctatactgca
tgtcccctcatgataggagatagacagtgcaacaaaaaagtgacaaataatggggatggg
aaatggcggtgtgacaggtgtgatcagactgttgatgaatgtgaatataggtacattctt
cggttccagattcaggaccatactggcttaacatgggttactgcatttcaagaatgtggt
gaccagataatgggtgtatctgcaaaagaattgtatttcttaaaatatgaggagcaggat
gatgataggtttgcagaaatcatgcgtaatgtgttattcaaccagtttatatttaaattg
aaagtgaaagaagagatgtatagtgatgagcagcatgttaagtcaacagtggtcaaagct
gagaagctgaacttccaaccagagaccaggtttctgtttgacctgataaacaagattaat
gggcaggaatccagcactttacctcctaagacagatgatgcaactctgaattcagggttt
aataatactggatttgggaataaacgcaaagaaccaatgagccctgttgcaagttatggt
gtcagccatagcggtatcagcagagatagtggactgcagggaaatcggcaaggtccatat
gggaatcagcttacaggctcacagttcgctccgcctggctctactgcaggcagtatcagc
agagaaagtggactgcagggaaatcggcaaggtccatatggaaatcagcctactggaaca
caaaatgctccaactggctcttctacaggcatgtatatgagctgtaatagttgtggtgga
acaggtcatagtgcttcaaactgtccaagcatgatgagtggtcagagccaggcatatgga
ggtggttttggcaatagggcaacttcagggatgagcagtggtggtggtggtggtggtggt
ggtggtgagtgttataaatgccatcagtatggacattgggcaagagattgcccaggcgta
agcaatgcacctgctgccaataacatgacatcaggaagatacgggaatactccaaggcaa
cacgtcggtggtttttga
DBGET
integrated database retrieval system
